Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4143g00008 ATGGATGGGGCCAGCCCTGATAATGAAGCGGAGCAGTCTCAGTGCAGAGACTTGGGCGTTGCATCCTCATCTTCAGCATCGACGGGATTAGGATGGAAGCCCAGGCAGCTTGGGTTTACTCCGTGCGTATGGCCTGATGAAACTTCGGATAATTCCCAAACTCTGCGTGTGGTTGTGAGGAAATCCCTGCTGGCAAGATTGACCAAGGAAATTGTTGAAACATACCAAATATGTAATCCGCAGTTCAAGTATTCTGAAGAGCTGAATCCAAAAAGATATTTGACCAGCCCATCAGTTGGAGTGCTTAATGATGGCTATGATAATGTTAACTCAGATCTTATTCTGACAGTGAACTATGTCTTGGTCAATTTAGAGAGAAATAGAAGATATCTTGTCAAAGATGTCCTTGGCCATGGGACATTTGGACAAGTGGCTAAATGTTGGGTTTCAGATACTAACAGCTATGTTGCTGTGAAGATCATAAAAAATCAACCCGCATACTATCAACAGGCATTGGTTGAAGTATCTATTTTGAATACGTTAAACAAGAAGTATGATCCTGAGGACAAGCATCACATTGTTCGTATATATGATTACTTTGTATATCAACGGCATTTGTGCATATGCTTCGAACTTTTGGACACAAACTTGTATGAGCTTATCAAGTTGAACCATTTTAGGGGATTATCTCTAAGTATTGTTCAGTTGTTCTCTAAGCAGATATTGCATGGACTGGCTTTATTAAAAGATGCGGGCATCATTCATTGTGATCTGAAGCCAGAAAACATTCTTCTATGTACAAGTGTGAAGCCAGCGGAGGTCAAGATTATTGACTTTGGATCAGCATGCATGGAAGATCGCACTGTCTACTCCTATATTCAGAGTCGATATTATAGGTCGCCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCTGAATTGTTTCTTGGATTGCCATTATTTCCTGGTGCTTCTGAATTCGATCTTTTGAGGCGGATGATTGAAATACTCGGAGGACAACCGCCTGATTATGTACTGAGGGAGGCTAAAAACACTAGTAAATTTTTTAAGTGTACTGGGAGTCTCCAGATTGGAGAGAACAGTGAGATTACGACAAACGGAAGAAGTTCTTATCAAGCATTGACTGAGGAAGAATATGAAGCTAGAGAGTTGAAGAAGCCATCAATTGGGAAAGAGTATTTCAATCATATGAACCTGGAAGAAATTGTTACTAACTATCCCTACCGGAAAAACTTGCCGAAGGAAGATATTCTTAAAGAGAGTCAAATACGAGTGGCATTAATTGATTTTTTGAGAGGGCTAGTTGAATTTGATCCCGCAAAACGCTGGTCACCGTTCCAGGCTTCAAGGCACCCTTTTGTGACAGGGGAACCTTTTACCCATCCTTATGAGCCCCCTCCAGAAACCCCTCGTGTGCCGGTTGTTCAAGCTGTCAAAGTGGATCATCACCCTGGTGGAGGGCACTGGTTTGCTGCTGGTCTATCACCTAATGTTCCTAGCAAAAGTAGGCCGTCATTATATAGCAGCTTGCATTTCCAGATGGTGCAATATCCACCCGCGAACAGCTACGGCAGTGTAGGAAGCCATGGTAGCTACAATGATGGTGTTGGGCTTGGAAGTAGCTACGGAAGTTATGGAGAAAGCAATAACATGTTTGCATACTATTCGCCTGTTGGTCCATCTGGTATTCATTTGCTTGGTCATGGGAGTACGTCAATGCTTGGAAATAGTCCTGATGCAAGGAGAAGAGTTATCCAATTCCAGCCGGGGAATGGTCGAGGCTTAAGCCCATCTGCTGCGACTTTCAGCCATCTGCCCCTTGGTGCCAGTCCCTCACAATTTACTCCTCCAGGTTCCTATACGCAAGTTTCAGCAAGCTCTCCAGGACACTATGGGCCTACTTCTCCCGCAAGAGGCACTTCTCATGGATCACCTTTGGGGAAGACATCTACTGCTAGCCAGTTCAATAGAAGAAAAAATTGGGGATGTTCCGGAAGTCCTCAAACTCAAGATATAACATTTTCTTCACATTGGCAAGGTCAATGTCCTGACAGCTCCATCCATGGTGAAGGAACATCTCAAGTTCTTAGCAGCTCACCATCTTATCTGCAATCAAATACTGATGCTGCAAACCGGAAGCAGCGAGGAGGTGGAGCTAATCAGAAAATGGCATGCTTGTTTATGCCAAGTTCTAATTCAAACTTGCAATCGGCAGAACTGGGGCATGACAAGCCAGAGTCTTGCTTATCAATGCCTGATCCTGGTGATTGGGATCCCAATTATAGTGATGAACTACTTCTGCAAGAGGATAGTTCAGATGGAAGCTGCTTGGCAACTGAGTTTGGCAGAAATATGAATATTGGTTCCACGGAACCATTGGTTGGATTTGGAAGGTTCAACCATGCCGCCAGCACAAGCTCTCCTATATCCATTCAGAGACAACATGGACCGGTTCAAGCATATTCTAATGTAGAGATGGATGGCCCTCCAGCTCATGATGTGCAAGTTGGATACCTGCGCTCGATGTCTAAGCCTTTTCATTTCATCCCTCGTATTTTGCAAAATTCTCCTAGCCGTTTTGGTCTGCAACCTGTCCAAAGATTTGCTCATGGCAGACCCACTCAGTTCAGTGATTGGAATCAAATTAAGGCTCAAGCTCCTCCTTCCAGTTTTGGCAGCGGAGAATCGCGTTCTCCAAGAAATAGCTCGTTTGCCAATAGTATGACATGGGGGCGTAGAGTTAATCCGCCTGTCTCAAACATTCCGCCTGCATCCTGTGCAAGGAAAGACTATGCAAGGATAGACTAG 2862 0.4413 MDGASPDNEAEQSQCRDLGVASSSSASTGLGWKPRQLGFTPCVWPDETSDNSQTLRVVVRKSLLARLTKEIVETYQICNPQFKYSEELNPKRYLTSPSVGVLNDGYDNVNSDLILTVNYVLVNLERNRRYLVKDVLGHGTFGQVAKCWVSDTNSYVAVKIIKNQPAYYQQALVEVSILNTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKLNHFRGLSLSIVQLFSKQILHGLALLKDAGIIHCDLKPENILLCTSVKPAEVKIIDFGSACMEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYVLREAKNTSKFFKCTGSLQIGENSEITTNGRSSYQALTEEEYEARELKKPSIGKEYFNHMNLEEIVTNYPYRKNLPKEDILKESQIRVALIDFLRGLVEFDPAKRWSPFQASRHPFVTGEPFTHPYEPPPETPRVPVVQAVKVDHHPGGGHWFAAGLSPNVPSKSRPSLYSSLHFQMVQYPPANSYGSVGSHGSYNDGVGLGSSYGSYGESNNMFAYYSPVGPSGIHLLGHGSTSMLGNSPDARRRVIQFQPGNGRGLSPSAATFSHLPLGASPSQFTPPGSYTQVSASSPGHYGPTSPARGTSHGSPLGKTSTASQFNRRKNWGCSGSPQTQDITFSSHWQGQCPDSSIHGEGTSQVLSSSPSYLQSNTDAANRKQRGGGANQKMACLFMPSSNSNLQSAELGHDKPESCLSMPDPGDWDPNYSDELLLQEDSSDGSCLATEFGRNMNIGSTEPLVGFGRFNHAASTSSPISIQRQHGPVQAYSNVEMDGPPAHDVQVGYLRSMSKPFHFIPRILQNSPSRFGLQPVQRFAHGRPTQFSDWNQIKAQAPPSSFGSGESRSPRNSSFANSMTWGRRVNPPVSNIPPASCARKDYARID 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4143g00008 953 MobiDBLite consensus disorder prediction 902 953 - -
Pral4143g00008 953 PANTHER DUAL SPECIFICITY PROTEIN KINASE 59 475 - -
Pral4143g00008 953 Pfam Protein kinase domain 132 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4143g00008 953 MobiDBLite consensus disorder prediction 1 28 - -
Pral4143g00008 953 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Pral4143g00008 953 SUPERFAMILY Protein kinase-like (PK-like) 125 494 IPR011009 -
Pral4143g00008 953 MobiDBLite consensus disorder prediction 609 732 - -
Pral4143g00008 953 SMART serkin_6 130 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4143g00008 953 ProSiteProfiles Protein kinase domain profile. 130 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4143g00008 953 Gene3D Phosphorylase Kinase; domain 1 95 210 - -
Pral4143g00008 953 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 93 209 - -
Pral4143g00008 953 Gene3D Transferase(Phosphotransferase) domain 1 211 473 - -
Pral4143g00008 953 MobiDBLite consensus disorder prediction 902 932 - -
Pral4143g00008 953 MobiDBLite consensus disorder prediction 7 28 - -
Pral4143g00008 953 CDD PKc_YAK1 130 472 - -
Pral4143g00008 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Pral4143g00008 953 MobiDBLite consensus disorder prediction 606 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4143g00008 Pral-Chr4143 45243 71991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4143g00008 129 358 MAP Kinase Gene Family AT3G18040 34.286 1.40e-31 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Pral4143g00008 Pkinase 6.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4143g00008 K18670 - gmx:100786931 1484.93