Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4142g00010 ATGGGTCTCTCAAATATCCCAAATTTAGCTGAAGGGGTACTTCCTGTACTTGTGGTGAACACAGTTCTGTCAGTAGTTCTGCTCAAGAACATGCTGAGATCTGTGCTGGAAGCCGTTGGAGTGACATCCTCGTCCTCCTCCTCATCGTCATCTTCATCGTATTCCCAGAACATGGAGGAAGATACAGATGAAGAAATAGAGCGAGAGAGTTGGAGAAGGAGGAGAGTGTCAATAACACAGTACAAGGTTTGTCAAGAAACAACAACAACAACAACAACAAGTGACTCTGGTCCGAGTGTCGGTGGTGGATTGGGTACGGTGGAGTGCAGCGTATGTCTATGTGGGTTCGAAGCAAATCAGGAGGTCAGTGAATTGCCCTGCAAGCATTTCTTCCACACAGCTTGCTTGGACAAGTGGTTCAATAACAAACACTTGACTTGTCCTCTGTGTCGTTCCATAGATTAG 465 0.4624 MGLSNIPNLAEGVLPVLVVNTVLSVVLLKNMLRSVLEAVGVTSSSSSSSSSSSYSQNMEEDTDEEIERESWRRRRVSITQYKVCQETTTTTTTSDSGPSVGGGLGTVECSVCLCGFEANQEVSELPCKHFFHTACLDKWFNNKHLTCPLCRSID 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4142g00010 154 Pfam Ring finger domain 108 151 IPR001841 -
Pral4142g00010 154 SMART ring_2 109 150 IPR001841 -
Pral4142g00010 154 SMART ringv_2 108 151 IPR011016 GO:0008270
Pral4142g00010 154 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Pral4142g00010 154 MobiDBLite consensus disorder prediction 43 57 - -
Pral4142g00010 154 CDD RING-H2_PA-TM-RING 108 151 - -
Pral4142g00010 154 SUPERFAMILY RING/U-box 108 152 - -
Pral4142g00010 154 MobiDBLite consensus disorder prediction 43 70 - -
Pral4142g00010 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 154 IPR013083 -
Pral4142g00010 154 PANTHER - 1 152 IPR044249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4142g00010 Pral-Chr4142 72399 73668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4142g00010 1 152 C3H Transcription Factor Family AT2G04240 35.220 6.85e-22 84.3