Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4142g00006 ATGTCTAAACCATGGGGTGGTGCCGGAGCTTGGGCCGCCGAGGCCGAGCGCGCCGAGGCCGAAGAGCGCGAGGCAGCGGCAGCATCTGCTGCTTCGGGATCCCAGAACTTCCCCAGCCTAAAGGAGGCCGTGAATACGAAGCCTAAGAAGAAGAAAATGACTCTGGGGGAGTTTAATAGTATTTCCACTGTCGGCGGAGGTGGTATGGCCACCGAGTATAAGGGCCTGACGCCGGATGAGATGCTTCGGCTCCCTACGGGCCCGAAAGAACGTTCTGCGGATGAGATGCCGTACGGTCGTGGGTTTTCCTCTTTTGGGCGTTCTGGTCCGCCGCAAGGACGCATGCGAGACCGTGATGACAATGATGGTTCTTGGGGTGGAGGAAGAAGATCCTATGGAGGATTTGATGAAGAACGCAGGGGTCCCCCTTCTAGGGTTTCTGACTACGATCAGCCATCCAGGGCAGACGGGGATGATAATTGGGCTTCGGGTAAAAAATCTCTTCCATCGTTCGATTCAGGTCGGCAAAATCGCTATGGTTCGCTTGGTGGTGGTTCCAGGGCGGATGAGAAGGATAACTGGTCAGTTGGTAAAAAGCCTTTTTCTGCTAGACCTTCCGCATTTGGTTCTGGGTTTCGCGATTCAGGTGTGGAGCCTGACCGCTGGACTAGGGGACCGTCACGTGATAACGACCGAGAGCGTCCCAGATTGGTTTTGGATCCGCCAAAAGGTAATGCCCCTGGTAATGAGCCGGTGAAGACAAATAAGGCGAATCCTTTTGGCGCAGCTAGGCCCAGGGAAGAAGTTTTGGCTGAGAAGGGTGTGGATTGGAAGAAGGTGGACTCTGAAATTGAAGCTAAGAAGACAAGTAGGCCTTCAAGTTCGCACTCTATCAGGCCATCCAGTGCTCAATCCAGTCGTTCTGAGGATACAGGGTTGCAGGAGACAGAAACTATGATAAAACCCAGACCAAAGGTGAATCCATTTGGGGATGCAAGACCCCGAGAAGTATTGCTGGAGGAGCGAGGTAAAGATTGGCGGAAGATTGATCTTGAATTGGAGCATCGTGGTGTTGACAGGCCAGAAACTAGGGAGGAAAAGTTATTGAAAGAAGAAATTGATAATTTGAAGAAGCAGCTTGAGAACGAGTCATCATTAGATTCAAGGAAGGAATCTGTGGAAGAAGCTCGTGGAGACCACAATAGCCCACAAAAAATTTTGCTTCAGAGGGAAAGGGAGCTGCAATCTCTAATTCGTGATCTGGATGACAAGGTTCGTTTTGGACAAAAAGCTATTGAAAGGCCGGGTTCCGGAGCGGGAAGGCCGGGTTCCGGAGCAGGAAGGCCACCTTCTGGAGCAGGAAGGGCTGCTGGTTTTTCTGATAGGCCGCATTCTCGGTCTGGCTCATTTGAGGATTCTCGGAGTGTGGAATTCACAGACAGGCCTCCATCCCGAGGCACAGGGGATTTGTGGACTCGGCCTGATGACAGAAGATCATTTCAAGGTGCCAGGGACAGAGGGTTTCCAAATAGCAGAGTCTTGGATAGGTCAACATCGAGAGAGAGATGGTGA 1572 0.5197 MSKPWGGAGAWAAEAERAEAEEREAAAASAASGSQNFPSLKEAVNTKPKKKKMTLGEFNSISTVGGGGMATEYKGLTPDEMLRLPTGPKERSADEMPYGRGFSSFGRSGPPQGRMRDRDDNDGSWGGGRRSYGGFDEERRGPPSRVSDYDQPSRADGDDNWASGKKSLPSFDSGRQNRYGSLGGGSRADEKDNWSVGKKPFSARPSAFGSGFRDSGVEPDRWTRGPSRDNDRERPRLVLDPPKGNAPGNEPVKTNKANPFGAARPREEVLAEKGVDWKKVDSEIEAKKTSRPSSSHSIRPSSAQSSRSEDTGLQETETMIKPRPKVNPFGDARPREVLLEERGKDWRKIDLELEHRGVDRPETREEKLLKEEIDNLKKQLENESSLDSRKESVEEARGDHNSPQKILLQRERELQSLIRDLDDKVRFGQKAIERPGSGAGRPGSGAGRPPSGAGRAAGFSDRPHSRSGSFEDSRSVEFTDRPPSRGTGDLWTRPDDRRSFQGARDRGFPNSRVLDRSTSRERW 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4142g00006 523 Pfam Plant specific eukaryotic initiation factor 4B 1 451 IPR010433 GO:0003743
Pral4142g00006 523 Pfam Plant specific eukaryotic initiation factor 4B 447 507 IPR010433 GO:0003743
Pral4142g00006 523 MobiDBLite consensus disorder prediction 166 180 - -
Pral4142g00006 523 MobiDBLite consensus disorder prediction 266 292 - -
Pral4142g00006 523 MobiDBLite consensus disorder prediction 490 523 - -
Pral4142g00006 523 Coils Coil 363 386 - -
Pral4142g00006 523 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 520 IPR010433 GO:0003743
Pral4142g00006 523 MobiDBLite consensus disorder prediction 217 239 - -
Pral4142g00006 523 MobiDBLite consensus disorder prediction 465 479 - -
Pral4142g00006 523 MobiDBLite consensus disorder prediction 293 315 - -
Pral4142g00006 523 MobiDBLite consensus disorder prediction 1 336 - -
Pral4142g00006 523 MobiDBLite consensus disorder prediction 376 408 - -
Pral4142g00006 523 MobiDBLite consensus disorder prediction 424 523 - -
Pral4142g00006 523 MobiDBLite consensus disorder prediction 132 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4142g00006 Pral-Chr4142 35132 41253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4142g00006 1 523 Eukaryotic Initiation Factors Gene Family AT3G26400 50.351 5.06e-141 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4142g00006 - - pcin:129309104 816.224