Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4138g00030 ATGGGCAGCGGACCTAAGACTCTGAGGAGCTTTCATATCCATGGGAAGAAGCACGAGTTCAGAGACGTCCCAAAAGGTTGCTTGGCGATCAGGGTGGGTCAAGGAGAAGACGATTTGCAGAGATTCGTGGTGCCTGTGATTTACTTCAATCACCCTCTCTTCTTGCAGCTGTTGAAGGAGGCAGAAGAAGAGTTCGGGTTCGATCAAAAGGGCGCCATAACGATTCCTTGCCACGTGGAGGAGTTCAGGTCCGTTCAAGACCTGATCGACAGGGAATGGTCTCTTCACCACCACCACCACCACACTCACGGTGGCTGCTTCGGATTTTGA 330 0.5212 MGSGPKTLRSFHIHGKKHEFRDVPKGCLAIRVGQGEDDLQRFVVPVIYFNHPLFLQLLKEAEEEFGFDQKGAITIPCHVEEFRSVQDLIDREWSLHHHHHHTHGGCFGF 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4138g00030 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 84 IPR003676 GO:0009733
Pral4138g00030 109 Pfam Auxin responsive protein 18 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4138g00030 Pral-Chr4138 227840 228740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4138g00030 22 83 Calmodulin-binding Proteins AT5G20810 59.677 5.16e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4138g00030 K14488 - cave:132187600 153.68