Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4138g00026 ATGAATGCCGCGAAATCTCGGACCCGCGTGGGAAAATACGAGCTGGGCAAAACCATTGGCGAGGGTAGCTTCGCCAAGGTGAAGTTTGCGAGAAACGTTGAGACAGGGAATCACGTCGCCATCAAAATCCTTGACCGCAATCATGTGCTTCGACACAAGATGGTGGAACAGCTGAAGAGAGAAATATCCACGATGAAGCTGATCAAACATCCAAATGTTGTTAACATATTTGAGGTGATGGCAAGCAAAACAAAGATTTACATTGTCCTGGAATTTGTTAGTGGGGGAGAACTATTTGACAAAATAGCTAATGATGGGAGACTTAAGGAGAATGAAGCAAGGCAATATTTTCCAACAACTTTTAATGCTGTTGATTACTGCCATAGTAGAGGCGTCTTTCACAGAGACTTGAAGCCTGAGAATCTTCTTCTGGATTCAAACGGTATTCTTAAAGTTTCAGATTTTGGACTGAGTACATACTCTCAGCGAGATGATGCGCTGCTGCGCACTGCCTGTGGAACCCCTAACTATGTTGCTCCTGAGGTGCTTAATGCTAAAGGCTATGATGGTTCAGCGGCTGATATTTGGTCATGTGGTGTCATTCTCTTTGTTCTGATGGCTGGATACTTACCTTTTGATGAGCCAAATCAAATGGCTTTGTATAAGAAAATTAGCAATGCTGAATTCTCATACCCATCATGGTTTCCGCCGGATGCAAAGAAACTACTGAGTCGTATTCTTGATCCAAACCCTCTCACAAGGATAAAAATTCCAGAACTCTTGGAAGATAAATGGTTCAAGGAAGGATACAAACCACCATGTTTTGAAGAGGAAGAGGGTATAAATGTAGATGACGTAGCTGCGGCCTTCAATGATTCTAAGGAAAACCTTGTGACAGAAAGGAAAGAGAAGCCCGTCTCTATGAATGCTTTTGAGCTCATTTCGAGGTCACAGAGTTTCAATCTTGACAGTTTGTTTGAGAAAGAGATGGGTATTGTGAAGCGAGAAACACGATTTACTTCTCAGCGGCCTGCACATGAAATTATATCTAAAATTGAGGAAGCTGCCAAACCATTGGGATTCAATGTTCACAGGCGAAACTACAAGATGAAGCTTCAAGGCGACAAGAGTGGAAGGAAGGGGCACCTCTCTGTGGCTACTGAGGTTTTTGAAGTGGCACCATCATTGCACATGGTCGAGTTGCGGAAGACCGGGGGTGATACACTGGAGTTTCACAAGTTCTACAAAAACTTCTCGTCAGGTTTGCAAGATGTGGTCTGGCAAGCTGAAGGGAAGAATGAAGGTAAAACAGAAGCTCAAAATGAAGGAAAAATTGAACAATCAAGGTAG 1350 0.4311 MNAAKSRTRVGKYELGKTIGEGSFAKVKFARNVETGNHVAIKILDRNHVLRHKMVEQLKREISTMKLIKHPNVVNIFEVMASKTKIYIVLEFVSGGELFDKIANDGRLKENEARQYFPTTFNAVDYCHSRGVFHRDLKPENLLLDSNGILKVSDFGLSTYSQRDDALLRTACGTPNYVAPEVLNAKGYDGSAADIWSCGVILFVLMAGYLPFDEPNQMALYKKISNAEFSYPSWFPPDAKKLLSRILDPNPLTRIKIPELLEDKWFKEGYKPPCFEEEEGINVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQSFNLDSLFEKEMGIVKRETRFTSQRPAHEIISKIEEAAKPLGFNVHRRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKNFSSGLQDVVWQAEGKNEGKTEAQNEGKIEQSR 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4138g00026 449 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Pral4138g00026 449 Pfam NAF domain 305 364 IPR004041 GO:0007165
Pral4138g00026 449 SUPERFAMILY Protein kinase-like (PK-like) 10 280 IPR011009 -
Pral4138g00026 449 CDD CIPK_C 309 422 - -
Pral4138g00026 449 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Pral4138g00026 449 Gene3D Kinase associated domain 1, KA1 302 428 - -
Pral4138g00026 449 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 413 - -
Pral4138g00026 449 SMART serkin_6 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4138g00026 449 ProSiteProfiles Protein kinase domain profile. 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4138g00026 449 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Pral4138g00026 449 FunFam Non-specific serine/threonine protein kinase 6 306 - -
Pral4138g00026 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Pral4138g00026 449 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Pral4138g00026 449 Gene3D Transferase(Phosphotransferase) domain 1 93 291 - -
Pral4138g00026 449 Pfam Protein kinase domain 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4138g00026 449 FunFam Non-specific serine/threonine protein kinase 302 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4138g00026 Pral-Chr4138 153224 159852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4138g00026 6 434 CBL-interacting serine-threonine protein kinases AT1G01140 74.771 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral4138g00026 Pkinase 6.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4138g00026 - - pcin:129288537 845.114