Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4138g00007 ATGCAAGAACAAGCTCGAAGTCAAGTGACAGGCGGTGCCAGCAATATGGAAGCACAAAGCTCTCAACATGCCCAAATTACTGAAGTCAGTGGTGATTTTCCTGAAGGAAGAAGAAATCCCGGAGGAACCAAGATTTGTGGGGAAGCACCATGTGGATTTGCAGATGCTGGGTCCATCTCAAAGGATTCTAAAGAACGATCAACATCAATGCGAAAGCTTTGGACTGCAGTGATCCTCTGTGTCATTTTCATGAGTGTTGAAGTATTTGGTGGCATTAAAGCCAATAGTCTAGCAATTCTGACTGATGCAGCCCATTTGCTTTCAGATGTCGCAGCATTTGCCATCTCCTTGTTCTCTTTATGGGCTGCTGGATGGGAAGCCACACCCCGTCAGTCATATGGATTTTTTAGAATAGAGATTCTTGGTGCCTTGGTTTCTATTCAGCTAATATGGCTGCTTGCAGGGATTCTCGTATACGAAGCCATTGCAAGAATCATTGATGGTTCTCACAAGGTGAATGGCTTCTTAATGTTTTTGGTCGCAGCATTTGGTCTGGTGGTTAACATCATCATGGCTTTGTTATTGGGTCATGATCATAGCCATGGACATGATGATCATCATCATGGTTTAGGCCATGGCCACAACCATGGTCATGGGTTTAAAGCGTCAACTCATCATGATCATCATAGTGGTGAGGATCACAAGCACCATCATCATGATGAAGAGGATCCTCAACATGAGCATCATCATCATTCTCATGAGGATGATAAGCATCATCACAGTCATGACAGTGCTGCTGAGCCACTTCTTGGTGGTGGATCAAAAGACAAACCAGAAAAGAAGAGGCGATGGAACATAAATGTACGAGGGGCGTATCTCCATGTTCTGGGGGACTCAATCCAAAGCGTTGGAGTAATGGTTGGGGGAGCTATCATTTGGTACAAGCCGGAGTGGCAAATAGTTGATCTAATTTGCACTCTTATTTTTTCAGTAATTGTTTTGTTAACAACAATCAATATGCTGCGAAGCATTCTTGAAGTTCTGATGGAGAGCACACCACGTGAGATCGATGCGACCAAGTTGGAGAGGGGTCTGTTAGAGATGGATGAAGTAGTGGCTGTTCACGAGCTGCATATATGGGCAATTACAGTGGGCAAGATTTTGTTGGCTTGTCACGTTAAAATCAGACCTGAAGCAGATGCAGATATGGTGCTGGACAAGGTTGTAGACTACATAAGGAGGGTTTATAACATCAGCCATGTAACTGTTCAGATAGAGCGTTAG 1284 0.4408 MQEQARSQVTGGASNMEAQSSQHAQITEVSGDFPEGRRNPGGTKICGEAPCGFADAGSISKDSKERSTSMRKLWTAVILCVIFMSVEVFGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIARIIDGSHKVNGFLMFLVAAFGLVVNIIMALLLGHDHSHGHDDHHHGLGHGHNHGHGFKASTHHDHHSGEDHKHHHHDEEDPQHEHHHHSHEDDKHHHSHDSAAEPLLGGGSKDKPEKKRRWNINVRGAYLHVLGDSIQSVGVMVGGAIIWYKPEWQIVDLICTLIFSVIVLLTTINMLRSILEVLMESTPREIDATKLERGLLEMDEVVAVHELHIWAITVGKILLACHVKIRPEADADMVLDKVVDYIRRVYNISHVTVQIER 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4138g00007 427 SUPERFAMILY Cation efflux protein transmembrane domain-like 67 350 IPR027469 -
Pral4138g00007 427 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 355 426 IPR036837 -
Pral4138g00007 427 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 20 427 - -
Pral4138g00007 427 MobiDBLite consensus disorder prediction 224 265 - -
Pral4138g00007 427 MobiDBLite consensus disorder prediction 203 281 - -
Pral4138g00007 427 MobiDBLite consensus disorder prediction 1 28 - -
Pral4138g00007 427 MobiDBLite consensus disorder prediction 1 44 - -
Pral4138g00007 427 Gene3D Cation efflux protein transmembrane domain 69 348 IPR027469 -
Pral4138g00007 427 Pfam Cation efflux family 73 349 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pral4138g00007 427 NCBIfam cation diffusion facilitator family transporter 70 427 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4138g00007 Pral-Chr4138 25477 29783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4138g00007 16 427 Inorganic Solute Cotransporters AT2G46800 68.039 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4138g00007 K14689 - gmx:100794876 570.852