Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4138g00003 ATGGAAGCACAAAGCTCTCAACATGCCCAAATTACTGAAGTCAGTGGTGATTTTCCTGAAGGAAGAAGAAATCCCGGAGGAACCAAGATTTGTGGGGAAGCACCATGTGGATTTGCAGATGCTGGGTCCATCTCAAAGGATTCTAAAGAACGATCAACATCAATGCGAAAGCTTTGGACTGCAGTGATCCTCTGTGTCATTTTCATGAGTGTTGAAGTATTTGGTGGCATTAAAGCCAATAGTCTAGCAATTCTGACTGATGCAGCCCATTTGCTTTCAGATGTCGCAGCATTTGCCATCTCCTTGTTCTCTTTATGGGCTGCTGGATGGGAAGCCACACCCCGTCAGTCATATGGATTTTTTAGAATAGAGATTCTTGGTGCCTTGGTTTCTATTCAGCTAATATGGCTGCTTGCAGGGATTCTCGTATACGAAGCCATTGCAAGAATCATTGATGGTTCTCACAAGGTGAATGGCTTCTTAATGTTTTTGGTCGCAGCATTTGGTCTGGTGGTTAACATCATCATGGCTTTGTTATTGGGTCATGATCATAGCCATGGACATGATGATCATCATCATGGTTTAGGCCATGGCCACAACCATGGTCATGGGTTTAAAGCGTCAACTCATCATGATCATCATAGTGGTGAGGATCACAAGCACCATCATCATGATGAAGAGGATCCTCAACATGAGCATCATCATCATTCTCATGAGGATGATAAGCATCATCACAGTCATGACAGTGCTGCTGAGCCACTTCTTGGTGGTGGATCAAAAGACAAACCAGAAAAGAAGAGGCGATGGAACATAAATGTACGAGGGGCGTATCTCCATGTTCTGGGGGACTCAATCCAAAGCGTTGGAGTAATGGTTGGGGGAGCTATCATTTGGTACAAGCCGGAGTGGCAAATAGTTGATCTAATTTGCACTCTTATTTTTTCAGTAATTGTTTTGTTAACAACAATCAATATGCTGCGAAGCATTCTTGAAGTTCTGATGGAGAGCACACCACGTGAGATCGATGCGACCAAGTTGGAGAGGGGTCTGTTAGAGATGGATGAAGTAGTGGCTGTTCACGAGCTGCATATATGGGCAATTACAGTGGGCAAGATTTTGTTGGCTTGTCACGTTAAAATCAGACCTGAAGCAGATGCAGATATGGTGCTGGACAAGGTTGTAGACTACATAAGGAGGGTTTATAACATCAGCCATGTAACTGTTCAGATAGAGCGTTAG 1239 0.4383 MEAQSSQHAQITEVSGDFPEGRRNPGGTKICGEAPCGFADAGSISKDSKERSTSMRKLWTAVILCVIFMSVEVFGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIARIIDGSHKVNGFLMFLVAAFGLVVNIIMALLLGHDHSHGHDDHHHGLGHGHNHGHGFKASTHHDHHSGEDHKHHHHDEEDPQHEHHHHSHEDDKHHHSHDSAAEPLLGGGSKDKPEKKRRWNINVRGAYLHVLGDSIQSVGVMVGGAIIWYKPEWQIVDLICTLIFSVIVLLTTINMLRSILEVLMESTPREIDATKLERGLLEMDEVVAVHELHIWAITVGKILLACHVKIRPEADADMVLDKVVDYIRRVYNISHVTVQIER 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4138g00003 412 MobiDBLite consensus disorder prediction 1 26 - -
Pral4138g00003 412 Gene3D Cation efflux protein transmembrane domain 54 333 IPR027469 -
Pral4138g00003 412 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 5 412 - -
Pral4138g00003 412 MobiDBLite consensus disorder prediction 188 266 - -
Pral4138g00003 412 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 335 IPR027469 -
Pral4138g00003 412 NCBIfam cation diffusion facilitator family transporter 55 412 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pral4138g00003 412 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 340 411 IPR036837 -
Pral4138g00003 412 MobiDBLite consensus disorder prediction 209 250 - -
Pral4138g00003 412 Pfam Cation efflux family 58 334 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4138g00003 Pral-Chr4138 25477 29784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4138g00003 1 412 Inorganic Solute Cotransporters AT2G46800 68.039 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4138g00003 K14689 - gmx:100794876 570.852