Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00043 ATGATGGCTCAGTCACCACAATCTCAGTCTCAGTCCAAGCCTCTTCACCACAAAGAGAGCAATCCCCAATCACCAATAATAGATGACGTTGAAGAAGAGAGTTTCTGCTACGCCATGCAGCTCGCGACCTCCTCCGCGATTTCCATGGCGATGCAAACAGCGGTGGAGCTCGGCGTCTTCGACGTCATTCATAGAGCTGGTCACGACGCCAAGCTCTCCGCCGCTGAGATCGCGACAGAGCTTTCTTTCAAGAACTCCGAAGCGCCTTCCGCACTCGATCGTCTCCTCTGGCTTCTAGCGTCGCACTCTGTTCTTTCCTGTTCCGTCATCACCAATGAGGATCGAGGGCCGGGGTGTTTCCGACGAGTGTACGGCCTCCGTCCCGTGGCCAAATTCTTTGCGAGAAATGAGGATGGAGTGTCGTTGGGCCCTTTTATTGCGTTGAATCAAGATAAGGTCTTTCTTGATAGCTGGCGAGAATTGAAGAATGCAATATGTGAAGGAGGCATAGCGTTCAATAGGGTGTATGGCTCACATGCTTTTGAGTATCCGGGATTGGATTCAAGGTTTAACGATGTCTTCAACAAGGCAATGGTGAATCAGACCACCTTAGTTGTGACCAAAATTCTTGAATCCTACCGAGGTTTCGAGGACATCACCCGACTTGTTGACGTTGGTGGAGGTCATGGGGTTACTCTAAGCTTGATCACTACTAAATATCCTCACGTTCAAGGAATCAATTTCGACCTGCCTCATGTCATCCAGCACGCTCCTCCTTACTCTGGAGTCGAACATCTGGGAGGAGATATGTTTGAAAGCGTGCCCCCAGGAGATGCCATCTTCATGAAGTGGATACTTCACGATTGGAGTGACGAATGGTGCTTGAAGCTGTTGAAGAACTGTCACAATGCCATTCCTGAAGATGGAAAAGTGATTGTGGTGGACGCAGTTTTGCCCATTATACCAGAGACTTCTGCTGCTGCAAAGACCACTTCCCAACTTGATGTGATGATGATGACTCAGAACCCAGGTGGCAAAGAGAGAAGTGAGCAAGAGTTCATGGAATTGGCTACGGCAGCAGGATTTAGTGGCATCAGATATGAATGTTTTGTTCGTAACTTTTGGATTATGGAATTCTTCAAATAG 1146 0.4843 MMAQSPQSQSQSKPLHHKESNPQSPIIDDVEEESFCYAMQLATSSAISMAMQTAVELGVFDVIHRAGHDAKLSAAEIATELSFKNSEAPSALDRLLWLLASHSVLSCSVITNEDRGPGCFRRVYGLRPVAKFFARNEDGVSLGPFIALNQDKVFLDSWRELKNAICEGGIAFNRVYGSHAFEYPGLDSRFNDVFNKAMVNQTTLVVTKILESYRGFEDITRLVDVGGGHGVTLSLITTKYPHVQGINFDLPHVIQHAPPYSGVEHLGGDMFESVPPGDAIFMKWILHDWSDEWCLKLLKNCHNAIPEDGKVIVVDAVLPIIPETSAAAKTTSQLDVMMMTQNPGGKERSEQEFMELATAAGFSGIRYECFVRNFWIMEFFK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00043 381 Pfam Dimerisation domain 49 100 IPR012967 GO:0046983
Pral4137g00043 381 Gene3D Vaccinia Virus protein VP39 134 381 IPR029063 -
Pral4137g00043 381 Gene3D - 16 133 IPR036388 -
Pral4137g00043 381 MobiDBLite consensus disorder prediction 1 19 - -
Pral4137g00043 381 MobiDBLite consensus disorder prediction 1 24 - -
Pral4137g00043 381 FunFam Caffeic acid 3-O-methyltransferase 16 133 - -
Pral4137g00043 381 PIRSF O-mtase 16 381 IPR016461 GO:0008168
Pral4137g00043 381 PANTHER O-METHYLTRANSFERASE 38 366 IPR016461 GO:0008168
Pral4137g00043 381 FunFam Caffeic acid O-methyltransferase 134 381 - -
Pral4137g00043 381 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 379 IPR029063 -
Pral4137g00043 381 CDD AdoMet_MTases 221 318 - -
Pral4137g00043 381 SUPERFAMILY "Winged helix" DNA-binding domain 30 136 IPR036390 -
Pral4137g00043 381 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 39 381 IPR016461 GO:0008168
Pral4137g00043 381 Pfam O-methyltransferase domain 158 363 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00043 Pral-Chr4137 306142 308289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00043 31 381 Monolignol Biosynthesis Gene Families AT5G54160 52.137 2.31e-137 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00043 K13066 - qsa:O6P43_027445 512.686