Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00035 ATGATGGACGCATACTCCTCTGGAGGAGAAGGGGTTGTTAAGACAAGAAAACCTTACACAATCACAAAGCAAAGAGAAAGATGGACTGAGGAGGAGCATAATAGGTTTCTAGAAGCCTTAAAGCTCTATGGGAGAGCATGGCAGCGCATTGAAGAGCATATCGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTACAAAGGTGGAGAAAGAGGCTCTTGAAAAGGGTGTTCCAATAGGGCAAGCTCTTGACATAGACATCCCTCCTCCACGGCCCAAAAGAAAGCCAACTAATCCTTATCCTCGGAAAACCAGTAATGGCTCTCCGGCACCACATAATGGAGCAAAAGATGGCATATTAACTTCTGTTTCGCCTTCGCATGGTAAAGAAGCACTGGACTTGGAGAAAGAACCACCTCCGGAGAAATCTAATGGAGATGAAAGACCAATAAATGTTACTGAAAACAAGGATGAGAGCTGCTCAAGAGTATTTGCTATTCCACCAGAGGCACCCTATTCCTCTATATCTTCAGCGAAAAACAGATCAATTTCATTGTCAATGCCACTGAGAAACTCATGCATTTTAAGGGAGTTCATCCCTTCAGTAAGAGTGGGAATTACTCGAGACGAAACAGATGAATCTTCTGTCACTATTGAGCTTGAAAATCAGAAGTGCAACATAGATGATGGAAAACTAGAACAGACGAAAGCCTCTAAATTGGAGGGTTCTGATGGTTCAGGTGTAAAATTGGTTTTGGAGTGTTCTGATGCTTCAGGTGTAAAATTGGTTCAAAGTCAGAAAACAGATGATCTCAATTGTGCATTAACAATAGATGGGATAAAAGACAATCAGAATTGCCCAAGGCATGTCCCAGGGCCCGGTCTTGATGGGAACCTCGAAGCAGATACACAACCTCCCAAAGATATGCTATTACGAGACTCTAAATTTCAGCCTCTGGGAGAGGTTAATGGGCAACATAATATTTTCACAGATTCAGCTGCGTCAAACACGGGCGAAACCCATGCTGCAGCTAGTTTTGCTGCTACATTTTGGCCCTATGCCAATGCAGATTCTCCTGATTCTCATGCTTCCTCTCAAGGAGGCTTCACATCAACACAAATTGGCTCTCCTCCAAGTATGGCAGCTATTGCAGCTGCTACTGTGGCTGCTGCAACTGCATGGTGGACGGCCCATGGACTGCTGCCTTTGTGTGCTCCACTCCATTCTGCTTTCTCCTCTCCTCCTGCATCTGCGGTGGTAATTCCTTCCATGAATACCGCTGAAGCACAAGCAGTTAAAAAAGATCAGAAAGAGACTACGGTTGAGAATCCTCCTCTGCAAGATCAGATGCCAAACGGAGAATATTCAGAAGCTGTGCAAGCTCAACATTCAGACTCCAAGTCGCAAGATGTTTCTTCATCAGATTCTAAGAGTAAAGATGCCGATTTAACCAATTCACCTAAGGCTGCTGAACATGACAAGAACGAAGCGATTTCTGAGAACCTTGACTCCAACAAGACCAACGGAAGAAAACTGGTTGACCGTTCTTCGTGTGGCTCCAACACAACCTCTAGTAGTGATATAGAGACAGACGCGTTAGAGAAGAATGAGAAAGGGAAGGAAGAGTCCTTGACACCAGATGCAAACCACTTAACAACTGAGCCTAGTAATCGCCGTAGTAGGAGTGCAGGCAACCTTACTGATTCTTGGAAAGAGGTCTCCGAAGAGGGTCGACAGGCCTTCCAGGCTCTCTTCTCCAGAGAGGTTTTGCCCCAAAGCTTTTCACCATCACACTTGGAAAAGGACATTCAGAAAGACCACAAAAATGAGGATCACAAGCAGAACATGGTTGACGGAGATGAAGACCTTGATAGCAACAAACACAGCTCTGATCAGGTAGGGGTAGAGAAGAACATGCCATCTGCAGAAAGAACACAGGGAGAGGAGGGACTTCTAACCATAGGGCTCGGGCAACGAAAGCTTAAGGCCTGTCGAACTGGGTTTAAACCTTACAAAAGATGTTCAGTGGAGGCCAAGGAAAATAGGGTTGGAAGTACTAGTAACCAGGGTGAAGAGAAAGGTCCGAAGAGAATACGCTTGGAGGGGGAGGCTTCAACTTGA 2136 0.4532 MMDAYSSGGEGVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKVEKEALEKGVPIGQALDIDIPPPRPKRKPTNPYPRKTSNGSPAPHNGAKDGILTSVSPSHGKEALDLEKEPPPEKSNGDERPINVTENKDESCSRVFAIPPEAPYSSISSAKNRSISLSMPLRNSCILREFIPSVRVGITRDETDESSVTIELENQKCNIDDGKLEQTKASKLEGSDGSGVKLVLECSDASGVKLVQSQKTDDLNCALTIDGIKDNQNCPRHVPGPGLDGNLEADTQPPKDMLLRDSKFQPLGEVNGQHNIFTDSAASNTGETHAAASFAATFWPYANADSPDSHASSQGGFTSTQIGSPPSMAAIAAATVAAATAWWTAHGLLPLCAPLHSAFSSPPASAVVIPSMNTAEAQAVKKDQKETTVENPPLQDQMPNGEYSEAVQAQHSDSKSQDVSSSDSKSKDADLTNSPKAAEHDKNEAISENLDSNKTNGRKLVDRSSCGSNTTSSSDIETDALEKNEKGKEESLTPDANHLTTEPSNRRSRSAGNLTDSWKEVSEEGRQAFQALFSREVLPQSFSPSHLEKDIQKDHKNEDHKQNMVDGDEDLDSNKHSSDQVGVEKNMPSAERTQGEEGLLTIGLGQRKLKACRTGFKPYKRCSVEAKENRVGSTSNQGEEKGPKRIRLEGEAST 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00035 711 MobiDBLite consensus disorder prediction 697 711 - -
Pral4137g00035 711 MobiDBLite consensus disorder prediction 435 579 - -
Pral4137g00035 711 NCBIfam myb-like DNA-binding domain, SHAQKYF class 23 72 IPR006447 GO:0003677
Pral4137g00035 711 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Pral4137g00035 711 MobiDBLite consensus disorder prediction 134 160 - -
Pral4137g00035 711 MobiDBLite consensus disorder prediction 595 655 - -
Pral4137g00035 711 PANTHER SWI/SNF COMPLEX-RELATED 13 594 - -
Pral4137g00035 711 MobiDBLite consensus disorder prediction 506 534 - -
Pral4137g00035 711 ProSiteProfiles SANT domain profile. 23 74 IPR017884 -
Pral4137g00035 711 FunFam protein REVEILLE 6 isoform X1 27 75 - -
Pral4137g00035 711 CDD SANT 27 70 IPR001005 -
Pral4137g00035 711 MobiDBLite consensus disorder prediction 535 552 - -
Pral4137g00035 711 MobiDBLite consensus disorder prediction 85 164 - -
Pral4137g00035 711 MobiDBLite consensus disorder prediction 604 636 - -
Pral4137g00035 711 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Pral4137g00035 711 MobiDBLite consensus disorder prediction 475 505 - -
Pral4137g00035 711 Pfam Myb-like DNA-binding domain 25 68 IPR001005 -
Pral4137g00035 711 Gene3D - 27 75 - -
Pral4137g00035 711 MobiDBLite consensus disorder prediction 683 711 - -
Pral4137g00035 711 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Pral4137g00035 711 SMART sant 24 72 IPR001005 -
Pral4137g00035 711 MobiDBLite consensus disorder prediction 553 574 - -
Pral4137g00035 711 MobiDBLite consensus disorder prediction 447 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00035 Pral-Chr4137 210578 219973 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4137g00035 Myb_DNA-binding 2.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00035 K12133 - gmx:100101859 815.068