Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00034 ATGATGGACGCATACTCCTCTGGAGGAGAAGGGGTTGTTAAGACAAGAAAACCTTACACAATCACAAAGCAAAGAGAAAGATGGACTGAGGAGGAGCATAATAGGTTTCTAGAAGCCTTAAAGCTCTATGGGAGAGCATGGCAGCGCATTGAAGAGCATATCGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTACAAAGGTGGAGAAAGAGGCTCTTGAAAAGGGTGTTCCAATAGGGCAAGCTCTTGACATAGACATCCCTCCTCCACGGCCCAAAAGAAAGCCAACTAATCCTTATCCTCGGAAAACCAGTAATGGCTCTCCGGCACCACATAATGGAGCAAAAGATGGCATATTAACTTCTGTTTCGCCTTCGCATGGTAAAGAAGCACTGGACTTGGAGAAAGAACCACCTCCGGAGAAATCTAATGGAGATGAAAGACCAATAAATGTTACTGAAAACAAGGATGAGAGCTGCTCAAGAGTATTTGCTATTCCACCAGAGGCACCCTATTCCTCTATATCTTCAGCGAAAAACAGATCAATTTCATTGTCAATGCCACTGAGAAACTCATGCATTTTAAGGGAGTTCATCCCTTCAGTAAGAGTGGGAATTACTCGAGACGAAACAGATGAATCTTCTGTCACTATTGAGCTTGAAAATCAGAAGTGCAACATAGATGATGGAAAACTAGAACAGACGAAAGCCTCTAAATTGGAGGGTTCTGATGGTTCAGGTGTAAAATTGGTTCAAAGTCAGAAAACAGATGATCTCAATTGTGCATTAACAATAGATGGGATAAAAGACAATCAGAATTGCCCAAGGCATGTCCCAGGGCCCGGTCTTGATGGGAACCTCGAAGCAGATACACAACCTCCCAAAGATATGCTATTACGAGACTCTAAATTTCAGCCTCTGGGAGAGGTTAATGGGCAACATAATATTTTCACAGATTCAGCTGCGTCAAACACGGGCGAAAATAAGAATAACACACCCCAATCTTCTATTCATCAATTATTTCCTGCTTATCCTCCCTTCCCGCAAGTTCTATGTAGTCAAGATCATTGCCATTCATGTTTTCACATGTCCTCCACATTTTCAAGTCTCATTGTCTCCACCCTCATGCAAAATCCTCCAGCCCATGCTGCAGCTAGTTTTGCTGCTACATTTTGGCCCTATGCCAATGCAGATTCTCCTGATTCTCATGCTTCCTCTCAAGGAGGCTTCACATCAACACAAATTGGCTCTCCTCCAAGTATGGCAGCTATTGCAGCTGCTACTGTGGCTGCTGCAACTGCATGGTGGACGGCCCATGGACTGCTGCCTTTGTGTGCTCCACTCCATTCTGCTTTCTCCTCTCCTCCTGCATCTGCGGTGGTAATTCCTTCCATGAATACCGCTGAAGCACAAGCAGTTAAAAAAGATCAGAAAGAGACTACGGTTGAGAATCCTCCTCTGCAAGATCAGATGCCAAACGGAGAATATTCAGAAGCTGTGCAAGCTCAACATTCAGACTCCAAGTCGCAAGATGTTTCTTCATCAGATTCTAAGAGTAAAGATGCCGATTTAACCAATTCACCTAAGGCTGCTGAACATGACAAGAACGAAGCGATTTCTGAGAACCTTGACTCCAACAAGACCAACGGAAGAAAACTGGTTGACCGTTCTTCGTGTGGCTCCAACACAACCTCTAGTAGTGATATAGAGACAGACGCGTTAGAGAAGAATGAGAAAGGGAAGGAAGAGTCCTTGACACCAGATGCAAACCACTTAACAACTGAGCCTAGTAATCGCCGTAGTAGGAGTGCAGGCAACCTTACTGATTCTTGGAAAGAGGTCTCCGAAGAGGGTCGACAGGCCTTCCAGGCTCTCTTCTCCAGAGAGGTTTTGCCCCAAAGCTTTTCACCATCACACTTGGAAAAGGACATTCAGAAAGACCACAAAAATGAGGATCACAAGCAGAACATGGTTGACGGAGATGAAGACCTTGATAGCAACAAACACAGCTCTGATCAGGTAGGGGTAGAGAAGAACATGCCATCTGCAGAAAGAACACAGGGAGAGGAGGGACTTCTAACCATAGGGCTCGGGCAACGAAAGCTTAAGGCCTGTCGAACTGGGTTTAAACCTTACAAAAGATGTTCAGTGGAGGCCAAGGAAAATAGGGTTGGAAGTACTAGTAACCAGGGTGAAGAGAAAGGTCCGAAGAGAATACGCTTGGAGGGGGAGGCTTCAACTTGA 2259 0.4506 MMDAYSSGGEGVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKVEKEALEKGVPIGQALDIDIPPPRPKRKPTNPYPRKTSNGSPAPHNGAKDGILTSVSPSHGKEALDLEKEPPPEKSNGDERPINVTENKDESCSRVFAIPPEAPYSSISSAKNRSISLSMPLRNSCILREFIPSVRVGITRDETDESSVTIELENQKCNIDDGKLEQTKASKLEGSDGSGVKLVQSQKTDDLNCALTIDGIKDNQNCPRHVPGPGLDGNLEADTQPPKDMLLRDSKFQPLGEVNGQHNIFTDSAASNTGENKNNTPQSSIHQLFPAYPPFPQVLCSQDHCHSCFHMSSTFSSLIVSTLMQNPPAHAAASFAATFWPYANADSPDSHASSQGGFTSTQIGSPPSMAAIAAATVAAATAWWTAHGLLPLCAPLHSAFSSPPASAVVIPSMNTAEAQAVKKDQKETTVENPPLQDQMPNGEYSEAVQAQHSDSKSQDVSSSDSKSKDADLTNSPKAAEHDKNEAISENLDSNKTNGRKLVDRSSCGSNTTSSSDIETDALEKNEKGKEESLTPDANHLTTEPSNRRSRSAGNLTDSWKEVSEEGRQAFQALFSREVLPQSFSPSHLEKDIQKDHKNEDHKQNMVDGDEDLDSNKHSSDQVGVEKNMPSAERTQGEEGLLTIGLGQRKLKACRTGFKPYKRCSVEAKENRVGSTSNQGEEKGPKRIRLEGEAST 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00034 752 FunFam protein REVEILLE 6 isoform X1 27 75 - -
Pral4137g00034 752 Gene3D - 27 75 - -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 547 575 - -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 724 752 - -
Pral4137g00034 752 PANTHER SWI/SNF COMPLEX-RELATED 13 635 - -
Pral4137g00034 752 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 74 IPR017930 -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 134 160 - -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 645 677 - -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 476 620 - -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 488 515 - -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 738 752 - -
Pral4137g00034 752 ProSiteProfiles SANT domain profile. 23 74 IPR017884 -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 576 593 - -
Pral4137g00034 752 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Pral4137g00034 752 CDD SANT 27 70 IPR001005 -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 516 546 - -
Pral4137g00034 752 Pfam Myb-like DNA-binding domain 25 68 IPR001005 -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 85 164 - -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 594 615 - -
Pral4137g00034 752 NCBIfam myb-like DNA-binding domain, SHAQKYF class 23 72 IPR006447 GO:0003677
Pral4137g00034 752 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Pral4137g00034 752 SMART sant 24 72 IPR001005 -
Pral4137g00034 752 MobiDBLite consensus disorder prediction 636 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00034 Pral-Chr4137 210578 219973 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4137g00034 Myb_DNA-binding 3.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00034 K12133 - gmx:100101859 897.116