Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00033 ATGGATTTCGGGAGCCCCAACCAGCCGCGCCTGATCGGAGATTACGTACTGGGACAGCAAATCGGGTCGGGTTCTTTTGCGGTGGTGTGGCACTCAAGGCATCGTCACTCGGGTTTGGAGGTTGCAGTTAAGGAGATTAACAAGAAACGGCTTAGCCCAAAAGTCAGTGAGAATCTACTCAAAGAGATTTCTATTCTTAGCACCATCGATCACCCAAACATTATACGATTGTTCGATGTAATCCAGACCAATGATAGGATTTACCTTATTTTGGAGTATTGCAATGGTGGTGACCTTGCTACTTACATTCATCGACGCGGAAAAGTTTCAGAATCCATTGCACGGCATTTTATGAGACACTTAGCTGCGGGGTTGATGGTACTCCAAGAAAAGCACCTCATTCATAGAGATCTAAAACCACAGAACTTACTATTGTCCAGTATTGGAGGTATACCACTTCTGAAAATAGGCGATTTTGGTTTTGCAAGGTCTCTCACACCCCAAGGGTTGGCAGACACACTATGTGGTTCACCGTTGTACATGGCTCCAGAGATAATTCAAAATCAGAAGTATGATGCCAAGGCTGATTTATGGAGTGTCGGAGCCATATTATTCCAGCTAGTGACTGGGAGGCCACCATTTGATGGAAATAGTCAATTTCAGCTTTTTCAGAACATTTTAAAATCCACTGAACTGCGGTTCCCACCAGAGGCTTTAAATGAGCTACATCCAGATTGTGTGGATCTTTGCAGAAGCCTTCTGCGTCTAACACCAGCTGAGCGATTGACATTCAAAGATTTCTTCAATCACAATTTCTTAAAGGAGCCCAGGTCAATTGTGAACGTTGAACGGCCTTCTATACAGCCACCAGACGGATCAACGGTCCAGCAATATGGTACCATCTCAACATCGGACAAAAGTCCTCATTTGCATCCTGGTCATCATCTCAAGACATCCATAGATGACCCTGTGGTAATCAGTTCTGCTGTTGATGAGACCGTGCTGTCACCAAGGAAGCTTAGTGGGAATACTGCTGACACCAAAAGTGTTAAGGGCACAATTTCAACAACTACTGGTGACAAGCAGGGACTTGCTTCTCATTTGATGGAGTCCATTGAGAAAGACTATGTCCTAGTCAATCGTCACTTTGCATCATCGGAGGCTTTCTCTGATTACCTTGGGGCATCTGTGCAAGATCATATCACTAGCGGGGTTTCGATCTGTCCTTCAGAGATGGTTGGCCTGGAAGTTGGAGTTGCAAAGCGAACAAATAATTTATCCTGTTGCTGTTTTGATGGTGATGGAGAAGAAAGAACAAAAAGTGGTAAATTTGAGGCGGCCCCTGTGTTTGCTGTCCTGGGGAAAGAGCAGGGTGCATCCTCAAAGCAGCCTTCGAGTGGGTTAGATTTGTTGCATCAATATGTGCAGATTCTCTCAGAACTTTCACAAGAAAAATATAATGCAGGATTGTATCTAGAATCGTTTGCAGTTGAACTGGTGGTTTTGGCTATATGGAAAAAAACTCTTGAAATTTGTAACTTTTGGCTGGACTCCATCGCTGAGGGCAAGTTGCCTGGAAGCACTTCAGGGAAGGAATCCACAATCTCATGCGAAGATGAAAGCAGATCACAACCCATGCTAGAGAAAATAGATTTTAGTGATCCTTCTGCTGTGTCCTTGTGGGCCAAGAAAGGATTTATTTTTGCAGTTGATCATGCTGAGAGACTTTCATGCCTTGTTCAAAATATGGATGGTGCATCTGAGATGCCAAATGCAATGGAGATCATATTTCAAAAAGCACTATCAATCGGCACAAGTGGTGCTGTAGACGAGTATATGGAAAATAGAGGTAAGGCAGCTGTATCATACTCAAAAGCGATGCTTCTTCTTTCATTTATTGTGAACGAAGCAGTTCACCTTCCACTGAACCCACCATTCTCACTAACTCCGGCTAATGAGAAGAGAATGTTACAGTATATATTGAACCTGCAGTCGCGTCTACGTCAGTCCTCGTCATCGGAGCCTTCCAAGGCATCCGACATTCTTTAA 2049 0.4397 MDFGSPNQPRLIGDYVLGQQIGSGSFAVVWHSRHRHSGLEVAVKEINKKRLSPKVSENLLKEISILSTIDHPNIIRLFDVIQTNDRIYLILEYCNGGDLATYIHRRGKVSESIARHFMRHLAAGLMVLQEKHLIHRDLKPQNLLLSSIGGIPLLKIGDFGFARSLTPQGLADTLCGSPLYMAPEIIQNQKYDAKADLWSVGAILFQLVTGRPPFDGNSQFQLFQNILKSTELRFPPEALNELHPDCVDLCRSLLRLTPAERLTFKDFFNHNFLKEPRSIVNVERPSIQPPDGSTVQQYGTISTSDKSPHLHPGHHLKTSIDDPVVISSAVDETVLSPRKLSGNTADTKSVKGTISTTTGDKQGLASHLMESIEKDYVLVNRHFASSEAFSDYLGASVQDHITSGVSICPSEMVGLEVGVAKRTNNLSCCCFDGDGEERTKSGKFEAAPVFAVLGKEQGASSKQPSSGLDLLHQYVQILSELSQEKYNAGLYLESFAVELVVLAIWKKTLEICNFWLDSIAEGKLPGSTSGKESTISCEDESRSQPMLEKIDFSDPSAVSLWAKKGFIFAVDHAERLSCLVQNMDGASEMPNAMEIIFQKALSIGTSGAVDEYMENRGKAAVSYSKAMLLLSFIVNEAVHLPLNPPFSLTPANEKRMLQYILNLQSRLRQSSSSEPSKASDIL 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00033 682 MobiDBLite consensus disorder prediction 283 312 - -
Pral4137g00033 682 CDD STKc_ATG1_ULK_like 21 272 - -
Pral4137g00033 682 Gene3D Transferase(Phosphotransferase) domain 1 6 315 - -
Pral4137g00033 682 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4137g00033 682 FunFam Serine/threonine-protein kinase ATG1 7 314 - -
Pral4137g00033 682 FunFam Non-specific serine/threonine protein kinase 3 95 - -
Pral4137g00033 682 Pfam Protein kinase domain 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4137g00033 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Pral4137g00033 682 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4137g00033 682 SUPERFAMILY Protein kinase-like (PK-like) 11 309 IPR011009 -
Pral4137g00033 682 MobiDBLite consensus disorder prediction 287 307 - -
Pral4137g00033 682 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pral4137g00033 682 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 8 527 IPR045269 GO:0004674|GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00033 Pral-Chr4137 203966 210133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00033 7 276 CBL-interacting serine-threonine protein kinases AT2G30360 38.043 1.85e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Pral4137g00033 Pkinase 2.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00033 - K08269 pcin:129288152 1070.07