Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00026 ATGGACTTATCACTCGGAAACAAGGAAGAAGATGAAGCCAACAAGCCTATCGAGAAAGAGCACATGTTTGATAAGGTTGTGACGCCCAGCGATGTGGGCAAACTGAATCGCCTCGTCATACCAAAACAGCACGCCGAGAGGTACTTCCCGCTCGACTCTTCCTCCAACGAGAAAGGCCTTCTCTTGAATTTCGAGGACCGCAACGGCAAGCTATGGCGTTTCCGGTACTCCTACTGGAACAGCAGCCAGAGCTATGTGATGACCAAGGGGTGGAGCCGTTTTGTTAAAGAGAAGAAGCTTGACGCCGGCGACATTGTATCCTTCCAACGAGGCCTCGGTGAATTGTATAGGCATAGGTTGTACATAGACTGGAGGCGCCGCCCGGATTACTCCGCCACCGATCATCATCGCCATGTCGCCGCAATTACACCGTTACTCCTTCCGAATCAGTATTCCATCAGATGGGATGGCAGATTATACTCGGTTCCCACGGCTGCGCCGGTGATGCCGCCACCACCGCGACCCCACGAGCATTTCCCACAAGTGAACTACAACAATTACCCCTTTCAGCAACAACACCAGCTACTTCAGTACCCGCGACAACATCATCATCATCATCACCAGCTCTATAGTGGAAGTCAAGGAAGCTATAATGAGCTGAATTTGGGATCTGGGTCGCTTTACTACCTGAGGACGTCGTCAGCGTCGGCGCCGGGAGATCGGAATTTAATTGAGCAGAGAGAGGGAGGGGGCAATATAAGTCCGATGATAATCGATTCCGTTCCAGTAGTCCATGGTAAGAGCAGTTCTAGTAGTGGTAGAATTACTGATACTACAGCAAAGAAGCTTAGGCTATTTGGGGTGAATATGGAATGTTCTTCGTCATCAAACACAGTAGGACATGTGCCAATGGCTGATTCATCACTTTCCTCACCAAATCTTCAGTATTTGAGAGAATCCCATGAAGGAGAAGACCCACTTTCTTCATCATCGTCAGCATCAAGGTTTGCAGATCAAAAGGGGAAAACTTCGGTGCTTTTTGATTTGAAACCGTCCTTCCAATACCGACAGTAG 1074 0.4907 MDLSLGNKEEDEANKPIEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLGELYRHRLYIDWRRRPDYSATDHHRHVAAITPLLLPNQYSIRWDGRLYSVPTAAPVMPPPPRPHEHFPQVNYNNYPFQQQHQLLQYPRQHHHHHHQLYSGSQGSYNELNLGSGSLYYLRTSSASAPGDRNLIEQREGGGNISPMIIDSVPVVHGKSSSSSGRITDTTAKKLRLFGVNMECSSSSNTVGHVPMADSSLSSPNLQYLRESHEGEDPLSSSSSASRFADQKGKTSVLFDLKPSFQYRQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00026 357 ProSiteProfiles B3 DNA-binding domain profile. 23 128 IPR003340 GO:0003677
Pral4137g00026 357 CDD B3_DNA 21 110 IPR003340 GO:0003677
Pral4137g00026 357 FunFam B3 domain-containing protein 16 137 - -
Pral4137g00026 357 Pfam B3 DNA binding domain 23 127 IPR003340 GO:0003677
Pral4137g00026 357 SMART B3_2 23 128 IPR003340 GO:0003677
Pral4137g00026 357 MobiDBLite consensus disorder prediction 319 341 - -
Pral4137g00026 357 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 11 306 IPR044800 GO:0003700
Pral4137g00026 357 Gene3D - 17 139 IPR015300 -
Pral4137g00026 357 SUPERFAMILY DNA-binding pseudobarrel domain 20 113 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00026 Pral-Chr4137 174547 196799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00026 2 298 RAV Transcription Factor Family AT2G46870 48.875 1.10e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral4137g00026 B3 1.7e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00026 K09287 - gmx:100781424 351.288