Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00022 ATGGCTGAGACATCCATGACGGATCCAGCTCCGATGCAGAGCCTTGTGCCTGTGGGATTCAGATTCTGTCCGACCGAGGAAGAGCTCGTCGCTTACTACCTCCGCCACAAATTGATGGCCCTTGATCCTTCCGTTTACACCACCTTACCTGACATTGACGTCTGCAAGTTCGAGCCCTGGGATTTATTATCTCTTGCTACTTCAGCGGCTTCGGCGACCAAGTTTGACGACTCGGAGTGCTTTTTCTTCAGTCCTCGTGATTATAAGTACGCTAACAGTACTCGGTGGAACAGGACAACATCGTCTGGCTTCTGGAAGGTCACCGGCCGGGACCGGAATATCAGAGAGCAAGGCACCAACAACGTCATTGGGACTAAGAGGATTTTAGTTTTCTACGAAGATCGTTCTTCTCGTGCACGTAAAACCAATTGGGTTATTCATGAATATCATGATGCCACACTTCCTTTGGAACAGGGGAACTTTGTCCTATGCAAGCTAATGAAGAAATATGAGAAGAAAACGAAAAGAAAAACTATTGACTTTGAGCAACGATTAATTGAGCTCGAAAGGGAGCTCAATAATGACATAGACTTTGAGCATGGAAATCAAGCAAATTTTAATATGATTTCAAATGAATATTGTTTATTAAATATGAGCTCAACAATTCAAACTTCCGCTCAGGAGGCTATAAACAACACAGGCACTCCAACTCAATTCCTTTCAAATGAAGATATAGACTCAATCATTCAAGAACTTTTCCCGTCAAATGAAGCTATACCATTAAAACTAAATTCAAGTGGTGAAACACCTCTTGATTTTCATTATGAAGAATCATACTCCAGCTTGGTCGTGTAG 855 0.4257 MAETSMTDPAPMQSLVPVGFRFCPTEEELVAYYLRHKLMALDPSVYTTLPDIDVCKFEPWDLLSLATSAASATKFDDSECFFFSPRDYKYANSTRWNRTTSSGFWKVTGRDRNIREQGTNNVIGTKRILVFYEDRSSRARKTNWVIHEYHDATLPLEQGNFVLCKLMKKYEKKTKRKTIDFEQRLIELERELNNDIDFEHGNQANFNMISNEYCLLNMSSTIQTSAQEAINNTGTPTQFLSNEDIDSIIQELFPSNEAIPLKLNSSGETPLDFHYEESYSSLVV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00022 284 ProSiteProfiles NAC domain profile. 16 169 IPR003441 GO:0003677|GO:0006355
Pral4137g00022 284 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 219 - -
Pral4137g00022 284 Pfam No apical meristem (NAM) protein 17 150 IPR003441 GO:0003677|GO:0006355
Pral4137g00022 284 Gene3D NAC domain 25 175 IPR036093 GO:0003677|GO:0006355
Pral4137g00022 284 SUPERFAMILY NAC domain 6 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00022 Pral-Chr4137 158129 160000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00022 12 169 NAC Transcription Factor Family AT4G35580 50.610 5.19e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4137g00022 NAM 1.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00022 - - pcin:129288806 228.794