Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00020 ATGGTGGACCAAGCTGATACTCTGATGCCTAAGGGTTTAAAATTCCGTCCGACCGATGAAGAACTCGTTGGTCATTACCTCCACCACAAATTGATGGCTGATGATCCTTCCATCCACAACATCATCCCTGAGATTGAAGTTTGCAAGTACGAACCCTGGGACTTACCAGCGTTATCGCCGATCAAGTCGGAGGACTCGGAATGGTTTTTCTTCAGTCCTCGCGATTACAAGTACTCAAACAGTACTCGGTGTAATAGGGCAACATCACGTGGTTACTGGAAACCCACCGGTAAAGAGAGGAAAATCAGGGATCGAGTCACCAACAAAGTCATTGGGACAAAGAAGACACTTGTTTTCTACCGAGGACGTGTTCCTGGCGTCAAAGATAATTGGGTAATTCATGAATATCATGATGCCCTCTTCCCTCCAGATCAGAGAGCCTATGTTGTATGTAGGTTACTGAAGAAAACTGAAAAGAAAACAAAAGAAAAATCCAATGAACTCGTTCATGACGAACAGGAGCCAAATAACCGTATAGTTGTTGAGTATGAAAATCAAGCAAGTTTGCGTGTGATTCCAGAAGTACAGTACTCTCTCTCGGATATGGATCCACTGATTCAAACGGCTGGGGAGTCAAATGAGCTTGCAGGCTCAATGATTCAGACAGGGCCTACTGAAATGAATCCAAGCGTTGAGACGCCACATGATGAGTCAGAAGAAGAATTTGATTTCAGTTCATTATTGCGGTCGCCTCCAAGTTTGCCTCCAAGTTTGGACGAGCAAGAGAGTAACTGGAAATGGTAA 804 0.444 MVDQADTLMPKGLKFRPTDEELVGHYLHHKLMADDPSIHNIIPEIEVCKYEPWDLPALSPIKSEDSEWFFFSPRDYKYSNSTRCNRATSRGYWKPTGKERKIRDRVTNKVIGTKKTLVFYRGRVPGVKDNWVIHEYHDALFPPDQRAYVVCRLLKKTEKKTKEKSNELVHDEQEPNNRIVVEYENQASLRVIPEVQYSLSDMDPLIQTAGESNELAGSMIQTGPTEMNPSVETPHDESEEEFDFSSLLRSPPSLPPSLDEQESNWKW 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00020 267 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Pral4137g00020 267 ProSiteProfiles NAC domain profile. 9 156 IPR003441 GO:0003677|GO:0006355
Pral4137g00020 267 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Pral4137g00020 267 SUPERFAMILY NAC domain 7 156 IPR036093 GO:0003677|GO:0006355
Pral4137g00020 267 Coils Coil 154 174 - -
Pral4137g00020 267 MobiDBLite consensus disorder prediction 219 267 - -
Pral4137g00020 267 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 211 - -
Pral4137g00020 267 MobiDBLite consensus disorder prediction 250 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00020 Pral-Chr4137 147315 149103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00020 9 156 NAC Transcription Factor Family AT4G35580 56.494 4.22e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4137g00020 NAM 1.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00020 - - pcin:129287716 290.041