Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00019 ATGGTTGAGAGCCAACCATGGTGGACCAATCTGATACTGATGCCTAAGGGTTTCAGATTCCGTCCGAGAGATGAAGAACTCGTTGGTCATTACCTCTACCACAAACTGATGGCTGATGATCCTTCCATCCACAACATCATCCCTGAGATTGAGATTTGCAAGTACGAACCATGGGACTTACCAGCATTATCGCTGATCAAGTCGGCGGACTCGGAATGGTTTTTCATCAGTCCTCGCGATTACAAGTACTCAAACCGTACTCTGTGTAATAGGACAACATCACGTGGTTACTGGAAACCCACCGGTCAAGAGACGAAAATCAAGGATCGAGTCACCAACAATGTCATTGGGACCAAAAGGACACTAGTTTTCTACCGAGGACGTGCTCCCGGTATTAAAGATAATTGGGTTATTCGTGAATGTCATGATGCCCTCTTCCCTCCCAATCAGAGAGCCTATGTTATATGTAGGTTACTGAAGAAAACTGAGAAGAAACCAAAAGAAAAATCCAATGAACTAGTTCATGATGAACAGGGGCCAAATAACCGTATAGTTGTTGAGTATGAAAATCAAGCAAGTTTGCGTGTGACTCCAGAAGTACAGTACTATCCCTCAGATATGGATTCACTGATTCAAACAGCTGGGGAGTCAAATGAGTTTGCAGGCTCATTGATTCAGACACGGCCTAGTGAAGTGAATCCAAGCGTTGAGATGCCACATGATGAGTCAGAAGAAGAATTTGATGTCAGTTCATTACTGCGGTCCCCTTCGAGTTTGGATGAGCTAGAGAGTAACTGGAAATGGTAA 807 0.4411 MVESQPWWTNLILMPKGFRFRPRDEELVGHYLYHKLMADDPSIHNIIPEIEICKYEPWDLPALSLIKSADSEWFFISPRDYKYSNRTLCNRTTSRGYWKPTGQETKIKDRVTNNVIGTKRTLVFYRGRAPGIKDNWVIRECHDALFPPNQRAYVICRLLKKTEKKPKEKSNELVHDEQGPNNRIVVEYENQASLRVTPEVQYYPSDMDSLIQTAGESNEFAGSLIQTRPSEVNPSVEMPHDESEEEFDVSSLLRSPSSLDELESNWKW 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00019 268 SUPERFAMILY NAC domain 6 161 IPR036093 GO:0003677|GO:0006355
Pral4137g00019 268 MobiDBLite consensus disorder prediction 250 268 - -
Pral4137g00019 268 MobiDBLite consensus disorder prediction 228 268 - -
Pral4137g00019 268 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Pral4137g00019 268 MobiDBLite consensus disorder prediction 235 249 - -
Pral4137g00019 268 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 216 - -
Pral4137g00019 268 Gene3D NAC domain 23 166 IPR036093 GO:0003677|GO:0006355
Pral4137g00019 268 ProSiteProfiles NAC domain profile. 14 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00019 Pral-Chr4137 134214 135904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00019 14 177 NAC Transcription Factor Family AT4G35580 50.000 2.40e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4137g00019 NAM 3.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00019 - - pcin:129287716 265.003