Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00018 ATGCAGAGCCGTGTGCCTCCGGGATTCAAATTCTGTCCTACCGAGGAACAGCTCGTCGCTTACTACCTCCGCCACAAATTGATGGCCCTTGATCCTTCCGTTTACACCACCTTACCTGACATTGACGTCTGCAAGTTCGAGCCCTGGGATTTATTATCTCTTGCTACTTCAGCGGCTTCGGCGACCAATTTTGACGACTCGGAGTGCTTTTTCTTCAGTCCTCCTGATTATAAGTACGCTAAGAGTACTCGGTGGAACAGGACAACATCGTGTGGCTCCTGGAAGTTCACTGGCCGGGAGCGGAATATCAGAGAGCAAGGCACCAACAATGTCATTGGGATTAAAAGGATTCTCGTTTTCTACGAAGGTCGTCCTCCTCGTGCACGTAAAACCAATTGGGTTATTCATGAATATCATGATGCCACACTTCCTCTGGAACAGAGGAACTTTATTCTATGCAAGTTAAGGAAGAAATATGAGAAGAAAATAAAAGAAAAAACTATTGACTTTGATCAAAGATTACTTGAGCTTGAAAGGGAGCTCAATAATGACACAGACTTCGAATATGAAAATCAAGCAAATTTCAATATGATTTCAAAGGAATATTGTTCATTAAATATGAGCTCAACCACTCAAACCTCTCCCCAAGAAGTTATAGACAACACAGGCACAAATATGAGCTCACCAACTCAAACCTCTCCCCAGGAGGTTATAGACAACACAGGCACTCAAACTCAATTCCTTTCAAATGAAGACATAGACTCAATGATTCAAGAACTTTCCCAGTCAAATGAAGCTATACCACAAAAACTAAATTCAAGCAGTGAAACACCGCTTGAGTTTGATTACGAAGAGTTGTACTCCAGCTTGGTCGTGTAG 879 0.4255 MQSRVPPGFKFCPTEEQLVAYYLRHKLMALDPSVYTTLPDIDVCKFEPWDLLSLATSAASATNFDDSECFFFSPPDYKYAKSTRWNRTTSCGSWKFTGRERNIREQGTNNVIGIKRILVFYEGRPPRARKTNWVIHEYHDATLPLEQRNFILCKLRKKYEKKIKEKTIDFDQRLLELERELNNDTDFEYENQANFNMISKEYCSLNMSSTTQTSPQEVIDNTGTNMSSPTQTSPQEVIDNTGTQTQFLSNEDIDSMIQELSQSNEAIPQKLNSSSETPLEFDYEELYSSLVV 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00018 292 Gene3D NAC domain 14 164 IPR036093 GO:0003677|GO:0006355
Pral4137g00018 292 Pfam No apical meristem (NAM) protein 6 139 IPR003441 GO:0003677|GO:0006355
Pral4137g00018 292 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Pral4137g00018 292 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 208 - -
Pral4137g00018 292 ProSiteProfiles NAC domain profile. 5 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00018 Pral-Chr4137 125482 140724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00018 5 166 NAC Transcription Factor Family AT3G49530 43.713 2.71e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4137g00018 NAM 2.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00018 - - pcin:129322017 237.654