Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00017 ATGGCAAATTCAGCTCCGACGAAGAGACGTGTGCCGGTGGGATACCGATTCCGTCCGACGGAGAAAGAGCTCGTCGCTCACTACCTCCGCCGCAAATTGAAGGCCCGTGATCCTTCCGTCCACAACACCATCCCGGAAATTGATGCCTGCAAGCTCGAACCCGGGGATATACTAGCGCTTTTGGCGAATAAGTTTGACGATTCGGAGTGCTTTTTCTTCAGTCCCTACAATTATAAGTACTCTAACAGTGCCCGGAGGGACAGGAGAACATTGCGTGGCTTCTGGAAAGTTACTGGTAGAGGCGGTAAAATCATAGATCAAGACACTAACAATGTCATTGGGACCGAGAAGAATCTAGTTTTCTATAAAAAGCACGAACCTTGTGCACTGAAAACTAATTGGGTAATTCATGAATATCATGACGCTACCTTACCAGCACATGAGGAATGTTGTTTCTCTGATATGAGTTCAAATACTCAAGTATCTTCCCAGTCAAATGAAGCTATAAGTTTGTTGACACAAATACCTTCCCAATCAAATGAAGCTATGGACTCAATAATTCAGATGATTTCCCAATCAAATGAAGCAGAAGATCCATTGATTCAAACATTTTTTCACTCAAGTGAAGTTATGAACCCAGAGGTTCAAATACCTTCCCAATCAATTGAATCTGAATCTATAGATTTAATGATTCAAGCACTCTTTCAATTGGATGAAAATATAAACTCAATGGTTTGTGCACCATTTATGCCAAATTCTAGCATTGAAGTACCACTTGATGCATGA 786 0.416 MANSAPTKRRVPVGYRFRPTEKELVAHYLRRKLKARDPSVHNTIPEIDACKLEPGDILALLANKFDDSECFFFSPYNYKYSNSARRDRRTLRGFWKVTGRGGKIIDQDTNNVIGTEKNLVFYKKHEPCALKTNWVIHEYHDATLPAHEECCFSDMSSNTQVSSQSNEAISLLTQIPSQSNEAMDSIIQMISQSNEAEDPLIQTFFHSSEVMNPEVQIPSQSIESESIDLMIQALFQLDENINSMVCAPFMPNSSIEVPLDA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00017 261 Pfam No apical meristem (NAM) protein 12 140 IPR003441 GO:0003677|GO:0006355
Pral4137g00017 261 SUPERFAMILY NAC domain 8 143 IPR036093 GO:0003677|GO:0006355
Pral4137g00017 261 Gene3D NAC domain 20 186 IPR036093 GO:0003677|GO:0006355
Pral4137g00017 261 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 149 - -
Pral4137g00017 261 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00017 Pral-Chr4137 109678 111573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00017 11 147 NAC Transcription Factor Family AT4G35580 46.154 8.80e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4137g00017 NAM 7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00017 - - pcin:129322017 209.149