Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00015 ATGGCGGACCCAGCTCTTATGCAGCAAGATATGCCGTTGGGGTACAGATTCTGCCCCACCGATGAAGAGCTCGTCGGTCACTACCTTCGACACAAATTGATGGCTGATGATCCCTCCATCCACGATACCATCCCTGAGATTGACGTTTGCAATTTCGAACCCGGGGAATTACCAGCTGTTGTTTCATCTTTTTCGCTGAACAAGTCAGGCGAACCAGAATGGTATTTCTTCAGTCCTCGCGGTTACAAGTACCCTAATAGCAATCGGTGTAATAGGGCAACATCGAGTGGCTACTGGAAAGTAACCGGTCAAGACAGAAAAATCAGGGATCTTGCCACCAACAACGTTATTGGGACCAAGAAGAGTCTGGTTTTCTACCAAGGACGCACCAAAAGTAATTGGATCATTCATGAATATGACCTTTTTCCTCCAAACCAGGGAACTTATGTTCTATGTAAGTTAACGAGGAAATACGAGAAGAAAACAAAAGAAAAGACGGATAAGACAAGGAAGACAAAGGACACTATGGCTGCCGAGTACGGAAATCAAGCAAATGATATGATTCCAGGACTACAAATTCCGGAGTCAGGTGACTTTGGAGGCTCACCGCACGAAGTGGGGTCAACCAGTGAGATGCTACTTGATGAGCCAGAAGACGCATTTGATGTGGATTCGTTTTTGCTGTGGTCTCTGAGTGAGGATAAGTAA 708 0.4576 MADPALMQQDMPLGYRFCPTDEELVGHYLRHKLMADDPSIHDTIPEIDVCNFEPGELPAVVSSFSLNKSGEPEWYFFSPRGYKYPNSNRCNRATSSGYWKVTGQDRKIRDLATNNVIGTKKSLVFYQGRTKSNWIIHEYDLFPPNQGTYVLCKLTRKYEKKTKEKTDKTRKTKDTMAAEYGNQANDMIPGLQIPESGDFGGSPHEVGSTSEMLLDEPEDAFDVDSFLLWSLSEDK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00015 235 ProSiteProfiles NAC domain profile. 11 157 IPR003441 GO:0003677|GO:0006355
Pral4137g00015 235 Pfam No apical meristem (NAM) protein 12 141 IPR003441 GO:0003677|GO:0006355
Pral4137g00015 235 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 169 - -
Pral4137g00015 235 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Pral4137g00015 235 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00015 Pral-Chr4137 106718 108083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00015 5 157 NAC Transcription Factor Family AT4G35580 50.610 6.54e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4137g00015 NAM 1.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00015 - - pcin:129287716 226.868