Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00014 ATGGCAAATTCAGCTCCGACGAAGAGACGTGTGCCGGTGGGATACCGATTCCGTCCGACCGAGAAAGAGCTCGTTGCTCACTACCTCAGCCGCAAATTGAAGGCCCGTGATTCTTCCGTTCACAACACTATCCCGGAGATTGATGCCTGCAAGCTTGAACCCGGGGATATACTAGCGCTTTTGGCGAACAAGTTCGACGATTCGGAGTGCTTTTTCTTCAGTCCCTACAATTACAAGTACTCTAACAGTACCCTGCGGGACAGGAGAACATTGCGTGGCTTCTGGAAAGTTACCGGTAGAGGCGGTAAAATCATAGATCAAGACACTAACAATGTCATTGGGACCAAGAAGAATCTGGTTTTCTATGAAAAGCACGAACCTCGTGCTCAGAAAACTAATTGGAGGACTCATGCTTTATGCTGGTTAAAAAAGAACAACGAGAAGAAAACAAAAGAAAAAACTTATCACTTAGTTGATGATAAGAGGAAGGCAAGTAATATAATACTTGAAGATAAAAATCAGGAATGTTGTTTCTCTGATATGAGTTCAAATACTCAAGTATCTTCCCAGTCAAATGAAGCTATAAGTTTGTTGACACAAATACCTTCCCAATCAAATGAAGCTATGGACTCAATAATTCAGATGATTTCCCAATCAAATGAAGCAGAAGATCCATTGATTCAAACATTTTTTCACTCAAGTGAAGTTATGAACCCAGAGGTTCAAATACCTTCCCAATCAATTGAATCTGAATCTATAGATTTAATGATTCAAGCACTCTTTCAATTGGATGAAAATATAAACTCAATGGTTTGTGCACCATTTATGCCAAATTCTAGCATTGAAGTACCACTTGATGCATGA 864 0.4005 MANSAPTKRRVPVGYRFRPTEKELVAHYLSRKLKARDSSVHNTIPEIDACKLEPGDILALLANKFDDSECFFFSPYNYKYSNSTLRDRRTLRGFWKVTGRGGKIIDQDTNNVIGTKKNLVFYEKHEPRAQKTNWRTHALCWLKKNNEKKTKEKTYHLVDDKRKASNIILEDKNQECCFSDMSSNTQVSSQSNEAISLLTQIPSQSNEAMDSIIQMISQSNEAEDPLIQTFFHSSEVMNPEVQIPSQSIESESIDLMIQALFQLDENINSMVCAPFMPNSSIEVPLDA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00014 287 Gene3D NAC domain 20 167 IPR036093 GO:0003677|GO:0006355
Pral4137g00014 287 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Pral4137g00014 287 SUPERFAMILY NAC domain 8 148 IPR036093 GO:0003677|GO:0006355
Pral4137g00014 287 ProSiteProfiles NAC domain profile. 11 163 IPR003441 GO:0003677|GO:0006355
Pral4137g00014 287 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00014 Pral-Chr4137 97492 111573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00014 11 137 NAC Transcription Factor Family AT4G35580 48.031 2.09e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4137g00014 NAM 3.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00014 - - pcin:129322017 216.083