Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00012 ATGCAGCAAGATATGCCGTTGGGGTACAGATTCTGCCCCACCGATGACGAGCTCGTCGGTCACTACCTCCGGCACAAATTGATGGCTGATGATCCCTCCATCCACGAGACCATCCCTGAGATTGATGTTTGCAATTTCGAACCCGGGGAATTACCAGCTGTTGTTTCATCGTTTTCACTGAACAAGTCGGGCGAACCAGAATGGTATTTCTTCAGTCCTCGCGATTACAAGTACCCTAATAGCAATCGGTGTAATAGGGCAACATCGAGTGGCTACTGGAAAGTGACCGGTCAAGACAGAAAAATCAGGGATCTTGCCACCAACAACGTTATTGGGACCAAGAAGAGTCTGGTTTTCTACCAAGGACGCACCAAAAGTAATTGGATCATTCATGAATATGACCTTTTTCCTCCAAACCAGGGAATTTATGTTGTATGCAAGTTAACGAGAAAATCCGAGAAGAAACCAAAAGAAAAAACGGATGAGATGGTTCATGGTACAAGGAAGGCAAATGCCAGTATCGCTGCCGGCTATGAAAATCAAGCAAATGATATGATTCCAGGAGTACAAATTCCGGACTCAGGTGACTTTGGAGGCTCACAGTACGAGGTGGGGTCAAGCAATGAGATGCTACGTGATGAATCAGAAGACGGATTTGATGTCGATTCGTTTTTGCTGTCGTCTCCGCTTGAGGATAAGCAAGACTAG 708 0.459 MQQDMPLGYRFCPTDDELVGHYLRHKLMADDPSIHETIPEIDVCNFEPGELPAVVSSFSLNKSGEPEWYFFSPRDYKYPNSNRCNRATSSGYWKVTGQDRKIRDLATNNVIGTKKSLVFYQGRTKSNWIIHEYDLFPPNQGIYVVCKLTRKSEKKPKEKTDEMVHGTRKANASIAAGYENQANDMIPGVQIPDSGDFGGSQYEVGSSNEMLRDESEDGFDVDSFLLSSPLEDKQD 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00012 235 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 166 - -
Pral4137g00012 235 MobiDBLite consensus disorder prediction 183 219 - -
Pral4137g00012 235 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Pral4137g00012 235 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Pral4137g00012 235 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Pral4137g00012 235 Gene3D NAC domain 14 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00012 Pral-Chr4137 94546 95852 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00012 3 176 NAC Transcription Factor Family AT4G35580 46.486 2.29e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4137g00012 NAM 7.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00012 - - pcin:129287716 236.498