Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00010 ATGGCGGACCCAGCTCTTATGCAGCAAGATATGCCGTTGGGGTTCAGATTCTGCCCGACAGATGAAGAGCTCGTCGGTCATTACCTCCGCCACAAATTGATGGCTGATGATCCCTCCATCCACGACACCATCCCTGAGATTGAGGTTTGCAAGTTCGAACCCTGGGAATTACCAGCTGTTGTTCCATCGTCTTCGCTGAACAAGTCAGGCGACCCAGAATGGTATTTCTTCAGTCCTCGCTGTTACAAGTACTCTAATAGCAATCAGTATAACAGGGCAACATCCAGTGGCTACTGGAAAGTAACAGGTCAAGACAGAGAAATCAGGGATCTTGCCACCAACAACGTTATTGGGACCAAACAGAGTCTAGTTTTCCACCAAGGACGCACTAAAACTAATTGGATCATTCATGAATATCAATATTGTGATGACTTTTTTCCTCCAAACCAGGGAACTTATGTTCTATGTAAGCTAAGGAGGAAATCCGGGAAGAAAACAAAAGAAAAAACCGATGAGACAAGGGAGCCAAATGACGGTATGGCTGCCGAGTATGGAAATCAAGCAAATGATATGATTCCAGGAGTACAAATTCCGGAGTCAGGTGACTTTGGAGGCTCACCGCACGAAGTGGGGTCAAGCAATGAGATGCTGCGTGATGAGCCAGAAGACGCATTTGATGTGGATTCGCTTTTGCTGTCGTCTCCGCTTGAGGATGATCAAGACTAA 726 0.4642 MADPALMQQDMPLGFRFCPTDEELVGHYLRHKLMADDPSIHDTIPEIEVCKFEPWELPAVVPSSSLNKSGDPEWYFFSPRCYKYSNSNQYNRATSSGYWKVTGQDREIRDLATNNVIGTKQSLVFHQGRTKTNWIIHEYQYCDDFFPPNQGTYVLCKLRRKSGKKTKEKTDETREPNDGMAAEYGNQANDMIPGVQIPESGDFGGSPHEVGSSNEMLRDEPEDAFDVDSLLLSSPLEDDQD 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00010 241 ProSiteProfiles NAC domain profile. 11 161 IPR003441 GO:0003677|GO:0006355
Pral4137g00010 241 Pfam No apical meristem (NAM) protein 12 140 IPR003441 GO:0003677|GO:0006355
Pral4137g00010 241 Gene3D NAC domain 20 167 IPR036093 GO:0003677|GO:0006355
Pral4137g00010 241 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 175 - -
Pral4137g00010 241 MobiDBLite consensus disorder prediction 164 241 - -
Pral4137g00010 241 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00010 Pral-Chr4137 76451 77982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00010 5 161 NAC Transcription Factor Family AT4G35580 50.610 1.11e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4137g00010 NAM 1.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00010 - - pcin:129287716 226.868