Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00009 ATGGCGGACCCAGCTCTTATGCAGCAAGATATGCCGTTGGGGTTCAGATTCTGCCCGACAGATGAAGAGCTCGTCGGTCATTACCTCCGCCACAAATTGATGGCTGATGATCCCTCCATCCACGACACCATCCCTGAGATTGAGGTTTGCAAGTTCGAACCCTGGGAATTACCAGGTCTCATAATCCAAAACCTTCATCTTCTTCTCCTACAAACCAATATCTGTTTTAGTGTAGCATTATTATTTATGCTTCAATCATCTTATGATGCTCTGCCGTTTGATCTTGCTTCTTCTTCTTCTTCTTATCCAACAGCTGTTGTTCCATCGTCTTCGCTGAACAAGTCAGGCGACCCAGAATGGTATTTCTTCAGTCCTCGCTGTTACAAGTACTCTAATAGCAATCAGTATAACAGGGCAACATCCAGTGGCTACTGGAAAGTAACAGGTCAAGACAGAGAAATCAGGGATCTTGCCACCAACAACGTTATTGGGACCAAACAGAGTCTAGTTTTCCACCAAGGACGCACTAAAACTAATTGGATCATTCATGAATATCAATATTGTGATGACTTTTTTCCTCCAAACCAGGGAACTTATGTTCTATGTAAGCTAAGGAGGAAATCCGGGAAGAAAACAAAAGAAAAAACCGATGAGACAAGGGAGCCAAATGACGGTATGGCTGCCGAGTATGGAAATCAAGCAAATGATATGATTCCAGGAGTACAAATTCCGGAGTCAGGTGACTTTGGAGGCTCACCGCACGAAGTGGGGTCAAGCAATGAGATGCTGCGTGATGAGCCAGAAGACGCATTTGATGTGGATTCGCTTTTGCTGTCGTCTCCGCTTGAGGATGATCAAGACTAA 864 0.4456 MADPALMQQDMPLGFRFCPTDEELVGHYLRHKLMADDPSIHDTIPEIEVCKFEPWELPGLIIQNLHLLLLQTNICFSVALLFMLQSSYDALPFDLASSSSSYPTAVVPSSSLNKSGDPEWYFFSPRCYKYSNSNQYNRATSSGYWKVTGQDREIRDLATNNVIGTKQSLVFHQGRTKTNWIIHEYQYCDDFFPPNQGTYVLCKLRRKSGKKTKEKTDETREPNDGMAAEYGNQANDMIPGVQIPESGDFGGSPHEVGSSNEMLRDEPEDAFDVDSLLLSSPLEDDQD 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00009 287 SUPERFAMILY NAC domain 4 61 IPR036093 GO:0003677|GO:0006355
Pral4137g00009 287 SUPERFAMILY NAC domain 111 207 IPR036093 GO:0003677|GO:0006355
Pral4137g00009 287 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 221 - -
Pral4137g00009 287 Pfam No apical meristem (NAM) protein 12 186 IPR003441 GO:0003677|GO:0006355
Pral4137g00009 287 Gene3D NAC domain 20 212 IPR036093 GO:0003677|GO:0006355
Pral4137g00009 287 ProSiteProfiles NAC domain profile. 11 207 IPR003441 GO:0003677|GO:0006355
Pral4137g00009 287 MobiDBLite consensus disorder prediction 210 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00009 Pral-Chr4137 76451 77982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00009 5 207 NAC Transcription Factor Family AT4G35580 39.048 9.61e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4137g00009 NAM 8.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00009 - - pcin:129287716 209.149