Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4137g00008 ATGGCGAACCCAGGTCCACTGCTGGAATTTATGCCTGTGGGATTTAGATTCCGCCCAACAGATGAAGAGCTCGTGGATTACTACCTGACCAACAAATTGATCGGTGAAGATTTCGTTCTCCAGATTATCCCCGAGGTTGACGTTTGTAAGCACGAGCCCTCGGATTTACCAGTGTTTTCGAAGATCAGGTCGGATGACCCAGAATGGTTTTTCTTCAGTCCTCGCCATTACAAGTACTCTAATAGTACTCGGTCTAACAGGGCAACATCGCGTGGCTTCTGGAAACCCACTGGCAAAGACAGGGACATCAAGGTTCGAGGCACCAACAAGATCATCGGGGCCAAGAAGACTCTGGTTTTCTATAGAGGTCGTGTTCCTCATGGCGTCAAGACCAACTGGGTCATCCATGAATATCAGGCTTTAGAATTTCCTGCTGACAAGAGGACCTTTGTTCTATGCAAGTTAATGAAGAAACCTGAGAGAGCAGAAGGGGGAACCGATGCATTAATCTTTGATGAAGGGGAGCCGAGTAGCAATGTGCCTTCTGACCTTGAAATTCTAGCAAGTGGGAGCAGAATCCCGGATGTACCCTCTTCGCCCTCAATCAATCTGGATTCAATTTTTCAGACACTACACCCAGCAGATGAAGTTGACACAGACTTCTTATCTCTTTCTCCCATAGTCAATGGGCAGGAATTTTCTTTCCAATTTTCCCCAAGGCTCAATTCCTATACAGGAAATGACAACAGCATTGTAAACTGGAATTTACAAACTACTGAAGAGGAAGACAATGCTGACGTGTTCATGAATTCAATCTTTGCCGATGATGAGGAGGAGTTGGAGCTGTTTGAGGAGGAGGTGGACCTGTCTGTGAACGAGGGAAGGAAAGATGCTTTTGTCCATGGGTTCAACCCCTCTCAACCTCTGAGAATGGTGCACTGTGAAAGCAGTGACACAGATGCAGAAGTTGTCTCTGCACAGTATGGCTATATTCCAGATACTTCGACCAAATCTAATAAATATGATGGTCCAAGGGGTGGAATCATGCTAATTTCAGAGGTTAACAGCTCTGAACCTTCTTCGAACCAAGAAGCAAAACAAGAGAAAAAGGGCAGATCCTTTCAATATGACGTGGACTCTTCCTCTGGGGACTCGACCCCTGCTAGACCACTCAAGATCAATCGGATAAAGCTTGCTAGCTCTGCTTCCACTCTAAAGACGTGCAAAACCCAATATCGACCAAGATCAGCCAGCTCTGTGTCACTGAGACCTGGGGCAAGAAGATCTCAAACACATAGGAAGATTTCAACCAAAGAGGCATATAATGAGGCTCAGAAAGAAACACTGGAGTGTTCAAACAATAATAAGAGGGAAGCACAGGTTACTGATAAAAGAAATACTTCAAAAGCCGCAAGCAAGGAATCCTCTGGTGTCGGTCGGAGGAATTCTTCCATTCAACTGGAGACACCATCAAGCCAAAACCTTAGTCCGCCATTCGTATATCTTGGCAATGTTGTTATAGGGCTTTTGCTGTTTGTATTCATTATTTGGGAAATGCTATCATGTGGGAAGCTCTGTAATCCTAACCGATTTGGTGTGATCCCTGGCCAAATTTTTTTAGGCCGTGGGATGGGACTTGGGAGGACATTGTATGAGGATTTGAGATCTGATAATTTAACGTCTACGCCAAAACCAGAGTTCCTGGCCTCCATGGCTAGCTCTTCACAGTTTGAGTTTGCAGTGCCATCAGCTTTAGGATGCCCCCTGTTGCAGCCAGAAATGCCTCCATATGTGCACTCTCCTCTGCAACAAGATATGCCGGTGGGGTTCAGATTCTGTCCGACGGATGAAGAGCTCGTCGGTCACTACCTCCACCACAAATTGATGGCTGATGATCCCTCCATCCACGACACCATCCCTGAGATTGAGGTTTGCAAGTACGAACCCTGGGAATTACCAGCTGCTGTTTCGTCGTTTTCTCTGAACAAGTCGGACGACCCAGAATGGTTTTTCTTCAGTCCTTGCGATTACAAGTACTCTAACAGCACTCGGTTTAATAGGGCAACATCGTGTGGCTACTGGAAAGTAACCGGAAAAGACAGGAAAATTAGGGACCGTGTCACCAACAATAACATTGGGATCAAGAAGACTCTTGTTTTCTACCAAGAACGTCTTCCAGGCATGAAAACTAATTGGATTATTCATGAATATCATCATACCCTTTTCCTTCCGAACCAAAGAACCCATGTTCTATGTAAGTTATTGAAGAAAACAAAAGAAAAAACGGATGATGAGCTGGTTTATGATAAAAGGGAGCCTATCTTTGTTGAGTGTGAAAATCAAGCAAATGGGTATATGATTTCAGGAGTTCAATATATCTCACATATGGATTCAATGATTCAAACACCGCCTGAAATGGACTCAACCACTGAGATTTCACATGATGAGTCCGAAGAACTTGATTTCATCAATTCATTCTTGAGGTCCACTCCAAGTATGGATGCTCCAGAGTAA 2514 0.4467 MANPGPLLEFMPVGFRFRPTDEELVDYYLTNKLIGEDFVLQIIPEVDVCKHEPSDLPVFSKIRSDDPEWFFFSPRHYKYSNSTRSNRATSRGFWKPTGKDRDIKVRGTNKIIGAKKTLVFYRGRVPHGVKTNWVIHEYQALEFPADKRTFVLCKLMKKPERAEGGTDALIFDEGEPSSNVPSDLEILASGSRIPDVPSSPSINLDSIFQTLHPADEVDTDFLSLSPIVNGQEFSFQFSPRLNSYTGNDNSIVNWNLQTTEEEDNADVFMNSIFADDEEELELFEEEVDLSVNEGRKDAFVHGFNPSQPLRMVHCESSDTDAEVVSAQYGYIPDTSTKSNKYDGPRGGIMLISEVNSSEPSSNQEAKQEKKGRSFQYDVDSSSGDSTPARPLKINRIKLASSASTLKTCKTQYRPRSASSVSLRPGARRSQTHRKISTKEAYNEAQKETLECSNNNKREAQVTDKRNTSKAASKESSGVGRRNSSIQLETPSSQNLSPPFVYLGNVVIGLLLFVFIIWEMLSCGKLCNPNRFGVIPGQIFLGRGMGLGRTLYEDLRSDNLTSTPKPEFLASMASSSQFEFAVPSALGCPLLQPEMPPYVHSPLQQDMPVGFRFCPTDEELVGHYLHHKLMADDPSIHDTIPEIEVCKYEPWELPAAVSSFSLNKSDDPEWFFFSPCDYKYSNSTRFNRATSCGYWKVTGKDRKIRDRVTNNNIGIKKTLVFYQERLPGMKTNWIIHEYHHTLFLPNQRTHVLCKLLKKTKEKTDDELVYDKREPIFVECENQANGYMISGVQYISHMDSMIQTPPEMDSTTEISHDESEELDFINSFLRSTPSMDAPE 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4137g00008 837 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Pral4137g00008 837 Gene3D NAC domain 615 762 IPR036093 GO:0003677|GO:0006355
Pral4137g00008 837 SUPERFAMILY NAC domain 9 158 IPR036093 GO:0003677|GO:0006355
Pral4137g00008 837 MobiDBLite consensus disorder prediction 407 426 - -
Pral4137g00008 837 MobiDBLite consensus disorder prediction 432 470 - -
Pral4137g00008 837 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Pral4137g00008 837 Pfam No apical meristem (NAM) protein 607 738 IPR003441 GO:0003677|GO:0006355
Pral4137g00008 837 SUPERFAMILY NAC domain 600 757 IPR036093 GO:0003677|GO:0006355
Pral4137g00008 837 ProSiteProfiles NAC domain profile. 606 757 IPR003441 GO:0003677|GO:0006355
Pral4137g00008 837 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 390 - -
Pral4137g00008 837 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Pral4137g00008 837 MobiDBLite consensus disorder prediction 407 493 - -
Pral4137g00008 837 MobiDBLite consensus disorder prediction 353 392 - -
Pral4137g00008 837 MobiDBLite consensus disorder prediction 471 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4137g00008 Pral-Chr4137 57817 68937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4137g00008 604 763 NAC Transcription Factor Family AT4G35580 52.410 6.19e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4137g00008 NAM 4.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4137g00008 - - pcin:129287580 689.108