Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00102 ATGAGCAAGTTAAGGCAAGTCTTCGCCGGGATCTCAGATCCTGGCAACCACAAGAGAAACAAAAAACTCTTTCTTGCTCTGTTTTCCACCCTGCTCCTTGTTGCCGCCGCTGTCGGCATCATCGCCGGAGTGAACTCCCGCCAAAAATCCTCTGATAATTTGAATTTCTCCTCCCATCCATCCCATGCTATCGTCAAATCTGCTTGTAGCTCAACCCTTTACCCTGAACTTTGCTTCTCTGCTATCTCCTCCGAGCCCGGGTTCACCGAGAAAGTCTCTTCCCAACGCGACGTCATCGAACTTTCCCTAAACATAACAACCAGAGCCGTTGAGCACAATTTCTTCACCGTCGAGAAGCTAATCGCCAAAAGGAAGGGAAGCCTCACGGGAAGAGAGAAAACCGCTCTTCATGACTGTTTGGAGACGATCGACGAGACGCTCGACGAGCTTCACACAGCTTCAGAAGATCTGAATGTCTATCCGAACAAGAAAACTCTGTATCAGCACGCTGACGATCTAAAGACTCTGATAAGTGCCGCCATTACCAACCAGGTCACCTGCCTTGACGGATTCTCTCACGAAGGCGCTGATAAGAAAGTGAGGAAAGCTCTAGAGGCAGGGCAGGTGCACGTGGAGCACATGTGCAGCAATGCTCTGGCGATGATTAAGAACATGACGGACACAGATGTGGCCAACTACGAGAGGAAGTTGGGGATTACGAAGAGCAGGAGGCTGATGTCGGCGACGTCGGAAGGCGGGGTTCAGTGGCCAGAGTGGATGTCGGCGGCGGACAGGCATTTGTTGCAGGCCACGAATGTGAAGCCTAACGTCGTGGTAGCAGCTGACGGGAGCGGAGATTTTAAGACGGTGGGGGAAGCTGTGGCTGCGGCGCCGGAAAAGAGTAAGAATAGATATGTGATTAAGATCAAAGCAGGAGTTTACAGAGAGAACGTGGAAGTTTCAAAGAAGAAAACGAATATAATGTTCTTAGGAGATGGAAGATCTAACACTATCATCACCGGAAGCCGGAATGTTGTTGACGGAAGCACCACCTTCCATTCCGCCACCGTTGCCGCAGTGGGAGAAAGATTCCTAGCTCGCGACATAACCTTTGAAAACACGGCCGGCCATGCCAAGCACCAGGCCGTCGCCCTCCGGGTGGGTTCCGACTTCGCTGCCTTCTACCAGTGTGACTTCCTCGCCTTCCAGGACACCCTTTACGTCCACAATAACCGCCAGTTCTTCATCAACTGCCTCATTGCCGGCACCGTCGACTTTATCTTCGGCAACTCCGCCGCCGTGTTCCAAGACTGCGACATCCACGCCCGACTCCCTGGCTCTGGCCAGAAGAACATGGTCACCGCACAGGGACGGGTTGATCCGAACCAGAACACCGGCATTGTGATCCAGAAGTGCCGTATCGGAGCAACGAAGGACCTGGAACCAAAGAAGAAGGACTTCAAGACCTTCCTGGGGCGGCCATGGAAGCAGTATTCGAGGACGGTGATAATGCAGACGAGCATAACTGACGTGATCGATCCGGTAGGATGGCACGAGTGGAATGGTGATTTTGCTTTGGACACTCTGTTCTACGCCGAGTATCAGAATACTGGCGCCGGTGCGGGAACGGCGAATAGAGTGAAGTGGAAGGGGTACAAGGTTATAACAAGTGCTTCGGAGGCTCAACAGTTTACTGCCGCCAACTTTGTCGGTGGCTCTAACTGGTTGGCGTCCACTGGCTTTCCTTTCTCTCTTGGTCTCTAG 1764 0.5255 MSKLRQVFAGISDPGNHKRNKKLFLALFSTLLLVAAAVGIIAGVNSRQKSSDNLNFSSHPSHAIVKSACSSTLYPELCFSAISSEPGFTEKVSSQRDVIELSLNITTRAVEHNFFTVEKLIAKRKGSLTGREKTALHDCLETIDETLDELHTASEDLNVYPNKKTLYQHADDLKTLISAAITNQVTCLDGFSHEGADKKVRKALEAGQVHVEHMCSNALAMIKNMTDTDVANYERKLGITKSRRLMSATSEGGVQWPEWMSAADRHLLQATNVKPNVVVAADGSGDFKTVGEAVAAAPEKSKNRYVIKIKAGVYRENVEVSKKKTNIMFLGDGRSNTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFENTAGHAKHQAVALRVGSDFAAFYQCDFLAFQDTLYVHNNRQFFINCLIAGTVDFIFGNSAAVFQDCDIHARLPGSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLEPKKKDFKTFLGRPWKQYSRTVIMQTSITDVIDPVGWHEWNGDFALDTLFYAEYQNTGAGAGTANRVKWKGYKVITSASEAQQFTAANFVGGSNWLASTGFPFSLGL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00102 587 Gene3D Invertase/pectin methylesterase inhibitor family protein 61 226 IPR035513 -
Pral4135g00102 587 Pfam Pectinesterase 276 572 IPR000070 GO:0030599|GO:0042545
Pral4135g00102 587 SMART PMEI_2 60 221 IPR006501 GO:0004857
Pral4135g00102 587 SUPERFAMILY Pectin lyase-like 273 586 IPR011050 -
Pral4135g00102 587 FunFam Pectinesterase 270 587 - -
Pral4135g00102 587 FunFam Pectinesterase 61 226 - -
Pral4135g00102 587 Pfam Plant invertase/pectin methylesterase inhibitor 64 221 IPR006501 GO:0004857
Pral4135g00102 587 NCBIfam pectinesterase inhibitor domain 56 225 IPR006501 GO:0004857
Pral4135g00102 587 ProSitePatterns Pectinesterase signature 2. 420 429 IPR033131 -
Pral4135g00102 587 CDD PMEI-like_3 67 226 - -
Pral4135g00102 587 Gene3D - 270 587 IPR012334 -
Pral4135g00102 587 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 226 IPR035513 -
Pral4135g00102 587 PANTHER PECTINESTERASE 32 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00102 Pral-Chr4135 765711 771115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00102 4 587 Carbohydrate Esterase AT3G14310 68.781 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00102 K01051 - gmx:100776623 868.996