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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pral4135g00091
ATGGCTTCGTCTTCTTCACTTAAAACAACCAGAAAGCCTGGGAAAGGTAGGAGCAAGATCGAGATTAAGAAAGTGGAACAAACCAGCAAGCGTTTCGTCACATTCTCCAAACGCAAATTAGGCCTCTTCCGCAAAGCCGCCGAACTATCCCTTCTCTGCGATTCTCAAATCGCCGTCGTCGTCTTCTCCCAATTCGGCAAGGTCTACTCCTCCGGCTACCCCGACCCTGACGCCGTCATCCGCCGCTACCTCTCCTGCGCATCCTCCTCGATGTCGGACTCTACGTCGGCTCATGATCCGGAAAGAGAATGGGCGATGTCGCCGCTGAGACGGGAATATGAGGAGGCCATGAAGGTGTTGGAGGAGGAAAAGAAATCCCTCAGTGCTGGACTACCGGGTCGGGTTGTGAGAATGGGTTCTGGTGGAACCGTTCGGTTGGGGAGATGGGTTTGGAAGAAGTCATGCAGTTCAAGGAGCGTGTTGAACAGCTGA
492
0.5366
MASSSSLKTTRKPGKGRSKIEIKKVEQTSKRFVTFSKRKLGLFRKAAELSLLCDSQIAVVVFSQFGKVYSSGYPDPDAVIRRYLSCASSSMSDSTSAHDPEREWAMSPLRREYEEAMKVLEEEKKSLSAGLPGRVVRMGSGGTVRLGRWVWKKSCSSRSVLNS
163
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pral4135g00091
163
PANTHER
MADS BOX PROTEIN
17
117
-
-
Pral4135g00091
163
MobiDBLite
consensus disorder prediction
1
21
-
-
Pral4135g00091
163
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
24
70
IPR002100
GO:0003677|GO:0046983
Pral4135g00091
163
PRINTS
MADS domain signature
52
73
IPR002100
GO:0003677|GO:0046983
Pral4135g00091
163
PRINTS
MADS domain signature
17
37
IPR002100
GO:0003677|GO:0046983
Pral4135g00091
163
PRINTS
MADS domain signature
37
52
IPR002100
GO:0003677|GO:0046983
Pral4135g00091
163
ProSiteProfiles
MADS-box domain profile.
15
75
IPR002100
GO:0003677|GO:0046983
Pral4135g00091
163
Coils
Coil
110
130
-
-
Pral4135g00091
163
Gene3D
-
28
103
IPR036879
GO:0003677|GO:0046983
Pral4135g00091
163
SUPERFAMILY
SRF-like
16
90
IPR036879
GO:0003677|GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pral4135g00091
Pral-Chr4135
690813
691304
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pral4135g00091
16
126
Type I MADS-box Gene Family
AT1G65360
38.739
1.51e-21
85.5
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-M-type
Pral4135g00091
SRF-TF
1.2e-19
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pral4135g00091
-
-
pcin:129319416
174.866
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