Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00072 ATGGCTAAGGAAGGAGGAGGAGGCAATAATGATGAGTTGTACGGGGTTCTGGGTTTGAATAAGGATTGCTCCCGATCAGAGCTCAGGCATGCCTACAAGAAACTTGTTCTGAAATGGCACCCGGATCGTTGTTCGGCGTCGGGGAATCCAAAGGCCATAGAAGAAGCTAAGAGCAAGTTCCAGGCAATCCAGCAGGCCTACTCTGTGTTGTCAGACGAGAACAAAAGGTTTCTGTACGACGTAGGAGTGTACGACAACGACGAGGACCAGGACGGCATGGGTGACTTCTTGAACGAAATGGTATCAATGATGAGCCAAACGACGCCTGAGGAAAATGGGGAGGAGAGCTTGGAGGAGTTGCAGAAGCTGTTGGATCAAATGTTTGAATCTGATAACGCGACAGAAGCCAATGCATGCTATGCTTCTTCTTCTTCATCTACACAAATGGAGCAGCTTCAAGATATGAAGAAGGGGAAAGGAGAAAGAAGATGA 492 0.4797 MAKEGGGGNNDELYGVLGLNKDCSRSELRHAYKKLVLKWHPDRCSASGNPKAIEEAKSKFQAIQQAYSVLSDENKRFLYDVGVYDNDEDQDGMGDFLNEMVSMMSQTTPEENGEESLEELQKLLDQMFESDNATEANACYASSSSSTQMEQLQDMKKGKGERR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00072 163 CDD DnaJ 12 72 IPR001623 -
Pral4135g00072 163 PRINTS DnaJ domain signature 55 75 IPR001623 -
Pral4135g00072 163 PRINTS DnaJ domain signature 32 47 IPR001623 -
Pral4135g00072 163 PRINTS DnaJ domain signature 14 32 IPR001623 -
Pral4135g00072 163 Gene3D DnaJ domain 9 156 IPR036869 -
Pral4135g00072 163 SMART dnaj_3 11 75 IPR001623 -
Pral4135g00072 163 ProSiteProfiles dnaJ domain profile. 12 83 IPR001623 -
Pral4135g00072 163 Pfam DnaJ domain 13 80 IPR001623 -
Pral4135g00072 163 Coils Coil 53 73 - -
Pral4135g00072 163 PANTHER PUTATIVE, EXPRESSED-RELATED 9 150 - -
Pral4135g00072 163 MobiDBLite consensus disorder prediction 136 163 - -
Pral4135g00072 163 MobiDBLite consensus disorder prediction 136 153 - -
Pral4135g00072 163 SUPERFAMILY Chaperone J-domain 11 83 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00072 Pral-Chr4135 584906 588334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00072 14 80 C2H2 Transcription Factor Family AT1G74250 44.118 1.90e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00072 - - lja:Lj3g3v2576120.1 196.823