Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00069 ATGGAAGCTGACGACAAGATCCAGTCGCCTCGCTCGCCGGCCAGCGAATCTCTGGGTTCGCCGCGAACCAACGGTCGGATCACGGTCACGGTGGCTGCACCGGCGCCGTCGCCTCCCCAAAACAGCTTGGCACTGGCGCTTCCGGTCCAGCACCAGCAGCCGAAGGGTAATGGTGGTGGTGGAGGAGGGAGGGAGGATTGCTGGAGTGAAGGAGCGACGGCGGTGTTGATCGACGCGTGGGGTGAGAGGTACTTGGAACTGAGCAGGGGGAATCTGAAGCAGAAGCACTGGAAGGAGGTTGCGGATATCGTGAGTAGCAGGGAAGACTACAGGAAAACCCCCAAGACTGATATTCAGTGCAAGAATCGGATCGACACTGTGAAGAAGAAGTACAAGCTGGAGAAGTCCAAGATCGCGGCTGGTGGTGGTCCTAGTAAATGGCCGTTCTACGAGAGATTGGACCAGTTGATCGGCCCGACTGCGAAAATTTCTGGGTCTGGCGGCGGCGCTGCCGCCGGAAATAACACGGCGAACAGTTTGTCAACTCAGAAAGTGCCTCTGGGAATTCCTGTAGGAGTTCGTGCTGTGAATCAGAATCCATATCAGGCTCATCAACGACTTCAGAAGCCCCAGCTTCGGATGAAGACGCCAAGCCAGAAGATACAGTTGCGAAAGCGTGCTCCAGTTAACTCAGATTCGTCGCCATCTGAGAGAGAATCGTCACCTGTTTCGAGTGATAGTTTTCCACCTGGTACATATGAGACGAAGAGACCTAGAATGCCAAGAGTGATCAATTCTGATGCTATGCCTGTGGAAACGAAGAATAAAGGTTGGGGAAGTGCTATAAGGGAATTGACGCAGGCGATACTGAAATTTGGGGAAGCATATGAAAAAGCAGAGAGCTCGAAGATTCAGCAGGTTGTGGAAATGGAGAAGCAGAGGATGAAATTTTCCAAGGAGATGGAATTGCAGAGAATGCAGTTCTTCATGAAGACCCAGCTGGAGTTATCGCAGCTGAAGCGTGGTAAGAGAGGAGGAGGAGGAGGAGGAGGAAACGCCAGCAACATCAACAGTAACATTAACAATCATAGTGACAGTGATAACCTGGTTAGATTGGATTAG 1122 0.5205 MEADDKIQSPRSPASESLGSPRTNGRITVTVAAPAPSPPQNSLALALPVQHQQPKGNGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSSREDYRKTPKTDIQCKNRIDTVKKKYKLEKSKIAAGGGPSKWPFYERLDQLIGPTAKISGSGGGAAAGNNTANSLSTQKVPLGIPVGVRAVNQNPYQAHQRLQKPQLRMKTPSQKIQLRKRAPVNSDSSPSERESSPVSSDSFPPGTYETKRPRMPRVINSDAMPVETKNKGWGSAIRELTQAILKFGEAYEKAESSKIQQVVEMEKQRMKFSKEMELQRMQFFMKTQLELSQLKRGKRGGGGGGGNASNINSNINNHSDSDNLVRLD 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00069 373 MobiDBLite consensus disorder prediction 10 27 - -
Pral4135g00069 373 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 41 343 IPR044823 -
Pral4135g00069 373 MobiDBLite consensus disorder prediction 203 264 - -
Pral4135g00069 373 MobiDBLite consensus disorder prediction 351 367 - -
Pral4135g00069 373 MobiDBLite consensus disorder prediction 1 66 - -
Pral4135g00069 373 Pfam Myb/SANT-like DNA-binding domain 65 156 IPR044822 -
Pral4135g00069 373 MobiDBLite consensus disorder prediction 203 251 - -
Pral4135g00069 373 MobiDBLite consensus disorder prediction 339 373 - -
Pral4135g00069 373 FunFam trihelix transcription factor ASIL2 68 133 - -
Pral4135g00069 373 Gene3D - 68 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00069 Pral-Chr4135 576161 577763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00069 1 364 Trihelix Transcription Factor Family AT3G14180 46.429 3.02e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral4135g00069 Myb_DNA-bind_4 3.7e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00069 - - qsa:O6P43_027506 451.055