Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00068 ATGGTTGGCTCTTCCTTTGAAATCGACTACAACTCCTCAGGCCAACACTGTCCTACACGACGCTACCCCTCAACGCCAGTGAGTTCTCGCAATACGTCTCGGTCTTTCACGGCAGCGTCGACCTCTCGGGGCAACCCCTATCCTGCTCTGGGCCGCCGGAACAAGGCTCCGGCGATTCACACTACCTCCGACGACGACCGTTCATGGCAGACAGAAGTTTCGTGGCAATTTGAGCCCAGTGGATGGCGCGAATACGGTAATAGAAATTTGGGCTCTGTTTTCGCTCCATGGGCCGCAAGCCCAATATCATCAGATAGGAGTCGGGTTTTCCGTCCGTCCGCGAAAGATTATTACCTTTCCAGAACGAGCGGCTTCCCCAGAGGAAATCGGTTTTCTGCGTACTCGAATTCTGAAACTTCACGCAACGTCATTCCGTCTGGGAGAGTCGAGCTTCAGAGCTACGTCGCTGAGGAAAATGGCGATCAGAATAGCAAGTCTTACAATGGATTTTCCAGATTGGACGTCATCAAGGAAGGAATCATCGGTACTAGAAAGGAGAAGAAGAATAGTCCATTGGCGGAAGAAGATGAACTTAGTTTTGCGTCTTTTAGTGTTGGTCGAGAACCAGAGCTCTCGTATACGAAACATGATGGTTACAGTGGCGGTCATGGGCAGATAGTGCCAGTGCATTTCAGCCATGGCGACGGCGGGTATAGTCATAATGGGATCGACAAGTTTTCTGGGTTTCGGGAAGAAGATGAGGAGGATATGGATGACTATGATGATGGTGATGATGATTTGGAGGCTCCAAAAGCAGTTGGATTGTTGAGCTTGTTTCGGTACTCAACAAAGTGGGATTTAGTGCTTGTATTTTTGGGTTGCGTGGGGGCTCTCATAAATGGAGGTTCGCTTCCTTGGTACTCTTTTCTGTTTGGAAAAGCAGTCAATAAGATTTCTCAACAATCCAGTGATGGTGCTGACAGAGACCAGATAATGAAGGATATTAACATGATATGCATATATATGACCGTTTTAGCTGCAGTGGTGATGGTTGGAGCATATTTAGAGATCACATGTTGGAGGTTGGTAGGAGAGCGATCTGCCCAAAGAATAAGAAGAGAATATCTAAGAGCAGTTCTTCGTCAGGACATTAGCTTTTATGATACAGAGATCAGCACTGCTGATATTATGCATGGGATTGCAAGTGATGTTGCACAAATTCAAGAAGTTATGGGAGATAAGATGGCTCACTTCATTCATCATTTATGCACATTCGTAACTGGGTATATAGTTGGGTTTATAAGGTCATGGAAAGTTGCTCTGGTGGTCCTCTCAGTCACCCCGGTGACTATGTTCTGTGGTATAGTTTACAAGGCCATTTATGGTGGTTTATCAGCAAAAGAAGAAGCTTCTTATAGAACAGCTGGTAGCATTGCAGAGCAGACCATCAGTTCAATCAGGACTGTTTTTTCTTTTGTTGGTGAAAGCCAGATGGCTTCAAAATATTCTGACCTGCTGAAAAATTCAGTCCCGGTTGGGGTCACCATTGGTTTTGCTAAGGGTGCAGGCATGGGAGTCATCTATTTAGTAACATACTCCACATGGGCCCTGGCTTTCTGGTATGGCTCTATCTTAATTGCCAAGGGAGAGATTGATGGAGGTCGGGCCATTGCCTGTTTCTTTGGAGTCATGGTCGGGGGAAGAGGCTTGGCATTGGCACTTTCATATTTTGCGCAGTTTGCACAAGGCATTGTTGCAGCAAGCCGAGTATTTGAAATCATAGAGAGAGTCCCTGAGATTGATCCCTACGGCCCTGACGGAAGGAGGCTCTCTAATGTTCGCGGAAGGATTGAGTTCAAAAGTGTTATCTTTGCATACCCAGCTCGTCCTGATGCTCTAATCCTTAATTCCCTTAAACTAGTTATTCCCTCTTCAAGAACTACGGCACTGGTTGGTGCCAGTGGAGGGGGCAAGTCCACTATTTTTGCTCTAATAGAGAGGTTTTATGACCCTATTGAAGGGATAATAACCTTGGATGGTCATGACTTGAGGACACTGCAAGTCAAGTGGCTAAGAGATCAAATTGGAATGGTGGGTCAGGAACCGATTCTTTTTGCCACAACCATTCTGGAAAATGTGATGATGGGGAAGGACAATGCCACCAAGAAAGAAGCAATTGCGGCTTGCATTGCAGCTGATGCCCACGACTTCATCTCTGGCCTACCCCTAGGTTACGACACTCAGGTTGGAGCTAAGGGTATCCAACTCTCAGGGGGTCAAAAGCAGCGAATTGCATTGGCTCGAGCCATTATCAAAGATCCTAAAATCCTTCTATTGGATGAACCTACCAGTGCTCTTGATGCTGAGTCAGAGTCTGTGGTCCAACGGGCTATTGACAAGATTTCTGCTCGACGAACAACCATTGTTATTGCTCACAGGATAGCAACAGTAAAGAATGCCCACGCTATTGTGGTTCTTGAAAATGGTTCTGTAACTGAGATTGGTGATCATCGACAGCTTATAGGAAAGGCAGGTGCCTACTATAACCTTGTCATGCTTGCTACGGAAGCCACATCAAAACCAGGGTCTAAGAGCATACAAAAGGTCAATGATTTTTCTGTCTATGAGAACTCAGTTCCTGATGCATCAAAATCAAGACATGCTGTGGATATCTCAAGGTCCAAGTTCTTAAAAGCCATTCAAGATGAAAAACAAGCTGATATGGAAGATGAGCAACAGAAGCAGCCCACAAATTTTCAACTTTCTGAGATATGGAAACTGCAAAAACCAGAGTTTTTGACGCTGTTTTCAGGATTTGCGATGGGCATGCTTGCTGGTGCTTTTCTCTCCCTTTTTCCATTGATTTTAGGCCTAGCCCTTGAAGTATACTTTAAACAGGACACTTCAACAATGGAAACAGATATTAACCATCTATGTTTAGTACTTGTTGGGCTAGGGCTTGGTTGCATAATCTCTCTGACAGGACAACAAGGTCTGTGTGGTTGGGCGGGAACTAAGCTCACAATCAGAATTAGAGACCTTCTTTTTCGATCCATACTAAGACAAGAACCAGGGTGGTTTGATTTTGAAGAAAATTCCACTGGAGTGCTAGTGTCAAGACTATCTATTGACTGTATTAGTTTTCGATCAGTGCTTGGTGATCGATTTTCTGTCCTTTTAATGGGGCTGAGCTCAGCTGCTGTTGGGCTTGGTGTGTGCTTTAAATTTGATTATAGAATAACTTTGTTGGCTGCTGCACTAACTCCTTTCACTCTTGGTGCAAACTATCTAAACTTGATTATAAACCTCGGGCCACGAGTCAACAATGATTCCTTTGCCAGAGCTAGTAACATCGCTTCTGGTGCAGTTTCAAACATAAGAACAACTATTGCATTTTCTGCCCAAGAACAGATAGTCAAATCCTTTGATCAAGCTTTATCAGAACCTAGGAAAAATTCAGTGAAAAGATCACAGATTCTCGGTCTAATGCTTGGGTTCTTCCAAGGTGCCATGTATGGAGCATACACCTTAACTCTTTGGTTTGGTTCCCTCCTTGTAAAACAAGGCAAAGCACAATTCGGGGATGTATACAAGATATTTCTCATCCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTAGCACCAGATACTTCTTTGGCAGCTTCAGCAATTCCAGCTGTTCTAGATATCATACACCGTAGACCATTGATAGGGAATGATAGGACGAAAGGAAAGAAACTAGAAAGACCAAAGCTATTAAAGCTAGAATTCAACATGGTGACATTTGCGTACCCATCTAGGCCTAAGGTGATAGTGTTGAGGAATTTCAATTTGAAGGTCAAAGGTGGAAGCACGGTTGCCTTAGTAGGGGCAAGTGGATCAGGAAAATCAACAGTCATATGGTTGATACAGAGGTTTTATGATCCAAACCAGGGGCGGGTGATGATGGGTGGACTAGATTTGAGAGACATTGATGTGGAGTGGTTGAGGAGGCAAACAGCTTTAGTGGGTCAAGAACCTGCACTGTTTGCTGGGAGCATAAGGGAGAATATCGCCTTTGGGGACCCAGAAGCTTCCTGGGCCGAAATCGAAGTGGCAGCAAAGGAAGCTTACATTCACAAATTCATTAGTAGCCTTCCTCAAGGTTATGAAACTCAGGTTGGTGAGAGTGGGGTCCAGCTATCAGGTGGCCAAAAACAGAGGTTAGCAATTGCAAGAGCCATATTGAAGAAATCAAGGGTACTACTACTTGATGAAGCAAGTAGTGCCTTGGACTTAGAATCAGAGAAACATGTCCAAGAAGCACTGAAGAATGTTACAAGAGGTACAACAACTATAATAGTAGCCCACCGTCTTTCTACAATCAGAGAGGCCAATAGCATCGCAGTTGTGAGAGAAGGGACTGTAGTTGAATATGGAAGCCATGATACCCTCCTTGCTTCATATCCCAACGGTTTGTATGCTAACCTGATTCGTTCTGAAACTGAAGTTAATGCCTTTACTGGGTTTCAATAA 4524 0.4447 MVGSSFEIDYNSSGQHCPTRRYPSTPVSSRNTSRSFTAASTSRGNPYPALGRRNKAPAIHTTSDDDRSWQTEVSWQFEPSGWREYGNRNLGSVFAPWAASPISSDRSRVFRPSAKDYYLSRTSGFPRGNRFSAYSNSETSRNVIPSGRVELQSYVAEENGDQNSKSYNGFSRLDVIKEGIIGTRKEKKNSPLAEEDELSFASFSVGREPELSYTKHDGYSGGHGQIVPVHFSHGDGGYSHNGIDKFSGFREEDEEDMDDYDDGDDDLEAPKAVGLLSLFRYSTKWDLVLVFLGCVGALINGGSLPWYSFLFGKAVNKISQQSSDGADRDQIMKDINMICIYMTVLAAVVMVGAYLEITCWRLVGERSAQRIRREYLRAVLRQDISFYDTEISTADIMHGIASDVAQIQEVMGDKMAHFIHHLCTFVTGYIVGFIRSWKVALVVLSVTPVTMFCGIVYKAIYGGLSAKEEASYRTAGSIAEQTISSIRTVFSFVGESQMASKYSDLLKNSVPVGVTIGFAKGAGMGVIYLVTYSTWALAFWYGSILIAKGEIDGGRAIACFFGVMVGGRGLALALSYFAQFAQGIVAASRVFEIIERVPEIDPYGPDGRRLSNVRGRIEFKSVIFAYPARPDALILNSLKLVIPSSRTTALVGASGGGKSTIFALIERFYDPIEGIITLDGHDLRTLQVKWLRDQIGMVGQEPILFATTILENVMMGKDNATKKEAIAACIAADAHDFISGLPLGYDTQVGAKGIQLSGGQKQRIALARAIIKDPKILLLDEPTSALDAESESVVQRAIDKISARRTTIVIAHRIATVKNAHAIVVLENGSVTEIGDHRQLIGKAGAYYNLVMLATEATSKPGSKSIQKVNDFSVYENSVPDASKSRHAVDISRSKFLKAIQDEKQADMEDEQQKQPTNFQLSEIWKLQKPEFLTLFSGFAMGMLAGAFLSLFPLILGLALEVYFKQDTSTMETDINHLCLVLVGLGLGCIISLTGQQGLCGWAGTKLTIRIRDLLFRSILRQEPGWFDFEENSTGVLVSRLSIDCISFRSVLGDRFSVLLMGLSSAAVGLGVCFKFDYRITLLAAALTPFTLGANYLNLIINLGPRVNNDSFARASNIASGAVSNIRTTIAFSAQEQIVKSFDQALSEPRKNSVKRSQILGLMLGFFQGAMYGAYTLTLWFGSLLVKQGKAQFGDVYKIFLILVLSSFSVGQLAGLAPDTSLAASAIPAVLDIIHRRPLIGNDRTKGKKLERPKLLKLEFNMVTFAYPSRPKVIVLRNFNLKVKGGSTVALVGASGSGKSTVIWLIQRFYDPNQGRVMMGGLDLRDIDVEWLRRQTALVGQEPALFAGSIRENIAFGDPEASWAEIEVAAKEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRLAIARAILKKSRVLLLDEASSALDLESEKHVQEALKNVTRGTTTIIVAHRLSTIREANSIAVVREGTVVEYGSHDTLLASYPNGLYANLIRSETEVNAFTGFQ 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00068 1507 CDD ABC_MTABC3_MDL1_MDL2 617 854 - -
Pral4135g00068 1507 SMART AAA_5 1285 1477 IPR003593 GO:0016887
Pral4135g00068 1507 SMART AAA_5 644 845 IPR003593 GO:0016887
Pral4135g00068 1507 ProSitePatterns ABC transporters family signature. 756 770 IPR017871 GO:0005524|GO:0016887
Pral4135g00068 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 617 853 IPR003439 GO:0005524
Pral4135g00068 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 291 582 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4135g00068 1507 CDD ABC_MTABC3_MDL1_MDL2 1259 1495 - -
Pral4135g00068 1507 Gene3D - 1247 1498 IPR027417 -
Pral4135g00068 1507 Gene3D - 607 855 IPR027417 -
Pral4135g00068 1507 Gene3D ABC transporter type 1, transmembrane domain 277 866 IPR036640 GO:0005524|GO:0016020
Pral4135g00068 1507 PANTHER ABC TRANSPORTER B FAMILY 254 853 IPR039421 -
Pral4135g00068 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1256 1495 IPR027417 -
Pral4135g00068 1507 MobiDBLite consensus disorder prediction 1 44 - -
Pral4135g00068 1507 FunFam ABC transporter B family member 1 1247 1498 - -
Pral4135g00068 1507 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1109 1249 - -
Pral4135g00068 1507 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
Pral4135g00068 1507 Gene3D ABC transporter type 1, transmembrane domain 1224 1501 IPR036640 GO:0005524|GO:0016020
Pral4135g00068 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1258 1494 IPR003439 GO:0005524
Pral4135g00068 1507 CDD ABC_6TM_Pgp_ABCB1_D1_like 291 590 - -
Pral4135g00068 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 938 1222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4135g00068 1507 Gene3D ABC transporter type 1, transmembrane domain 915 1223 IPR036640 GO:0005524|GO:0016020
Pral4135g00068 1507 SUPERFAMILY ABC transporter transmembrane region 923 1238 IPR036640 GO:0005524|GO:0016020
Pral4135g00068 1507 MobiDBLite consensus disorder prediction 1 65 - -
Pral4135g00068 1507 Pfam ABC transporter 635 784 IPR003439 GO:0005524
Pral4135g00068 1507 CDD ABC_6TM_Pgp_ABCB1_D2_like 925 1240 - -
Pral4135g00068 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 608 852 IPR027417 -
Pral4135g00068 1507 FunFam Multidrug resistance protein 1, 2, 3 615 867 - -
Pral4135g00068 1507 Pfam ABC transporter transmembrane region 938 1206 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4135g00068 1507 Pfam ABC transporter transmembrane region 290 566 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4135g00068 1507 SUPERFAMILY ABC transporter transmembrane region 278 602 IPR036640 GO:0005524|GO:0016020
Pral4135g00068 1507 ProSitePatterns ABC transporters family signature. 1397 1411 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00068 Pral-Chr4135 551707 561081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00068 1002 1497 Calmodulin-binding Proteins AT2G36910 39.759 2.90e-100 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00068 K05658 - gmx:100816700 2010.34