Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00039 ATGCATCTCAGGCTAGGCTTAAAACACTTTGTCGTCGTATCCTCCGCCGGCGTTGCCGAAGCCTTCCTCAAAACCCACGGCCACACTTTCTCATCCAGACCAAAAGCCACCGCCGGAAAGTACGCAGCCTACAATTACTCCGATATTCTCTGGGCCCCTTACGGCCCACATTGGCGCCAAGCCCGCAAGATATGCTTCACACAATTATTATCTCAGAAGAGCATAGAATCCAGCGAGTACATCAGAAAGGAAGAGATGAAAACTATGCTGAAGGAACTGTTCATTTCTTCGGGCACGACCGTATTACTGAAGGATTACCTTTATAGTTTAAACCTGAATATTATAAGTCGCATGGTGTCGGGGAAGAAGTACGTGGAGAAGGGGCAAAGTGGCTTTGTGAGCTGGGAAGAGTTCAGAAAACTGGTGGATGAGTTTGTCTTGATCAATACTGGGGTTGCGAATATTGGGGATCTGATACCTTGGCTCAGTTTCTTGGACTTGCAGGGTTATATAAAGAGAACGAAGGATTTCAGTGTGAAGTTTGATAGGTTTCTGGAACATGTGTTAAATGAGCACGAAGAAAGAAGGAAAGGTGTTGAGAATTATGTGGCCAAGGACATGGTGGATTTGCTTTTAAAGCTCGCTGAAGATCCCACTCTTGAGGTCAAGCTTGAAAGGAACAGTGTCAAAGGAATAACTCAGGACCTTTTGATAGGTGCGATAGATACCTCAGCAGCAACTATGGAATGGGCAATGTCTGAGCTATTGAAAAACCCAGAAATCTTAAGGAAGGCCACAGAAGAGTTGGAGAGAGTGATCGGCCGAGACAGATGGGTAGAAGAGAAAGACATAGTGAACTTGCCTTACATTGAAGCTATTTTCAAAGAAACAATGAGATTTCACCCTCCAGCACCTGTGTTGCCTCCGAAGACGTCATCCATAGATGGCGACTCCAAAGTTTTAGGGTATGACATCCCAAAGGGGACCCAAATTATCGTTAATGTGTGGGCTATTGGTAGAGATCCTGCAACATGGGACAACCCTAATGAGTTTTACCCGGAGAGGTTCATAGGTAAAGATATTGATGTAACAGGACACCACTTTGAGTTATTACCATTTGGGGCCGGAAGAAGGATCTGCCTTGGTTATCCTCTTGCACTTAAGGTTGTTCATGTAAGCTTGGCCAATTTGGTGCATGGCTTCTCATGGAGCCTGCCGGATCATATGAAGAAGGAGGACCTAAACATGGAGGAAATTCCTAGGCTTACTAGTGTCAGAAAACAACCACTTGAAGCTGTCATTAAGCCTAGACTTTCATCTCATGATCTTTACCTCTAA 1338 0.4492 MHLRLGLKHFVVVSSAGVAEAFLKTHGHTFSSRPKATAGKYAAYNYSDILWAPYGPHWRQARKICFTQLLSQKSIESSEYIRKEEMKTMLKELFISSGTTVLLKDYLYSLNLNIISRMVSGKKYVEKGQSGFVSWEEFRKLVDEFVLINTGVANIGDLIPWLSFLDLQGYIKRTKDFSVKFDRFLEHVLNEHEERRKGVENYVAKDMVDLLLKLAEDPTLEVKLERNSVKGITQDLLIGAIDTSAATMEWAMSELLKNPEILRKATEELERVIGRDRWVEEKDIVNLPYIEAIFKETMRFHPPAPVLPPKTSSIDGDSKVLGYDIPKGTQIIVNVWAIGRDPATWDNPNEFYPERFIGKDIDVTGHHFELLPFGAGRRICLGYPLALKVVHVSLANLVHGFSWSLPDHMKKEDLNMEEIPRLTSVRKQPLEAVIKPRLSSHDLYL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00039 445 Pfam Cytochrome P450 3 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PRINTS P450 superfamily signature 292 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PRINTS P450 superfamily signature 371 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PRINTS P450 superfamily signature 239 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PANTHER CYTOCHROME P450 98A9 1 444 - -
Pral4135g00039 445 CDD CYP71_clan 1 430 - -
Pral4135g00039 445 Gene3D Cytochrome P450 1 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 FunFam Predicted protein 237 432 - -
Pral4135g00039 445 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 373 382 IPR017972 GO:0005506|GO:0016705
Pral4135g00039 445 PRINTS E-class P450 group I signature 228 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PRINTS E-class P450 group I signature 370 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PRINTS E-class P450 group I signature 334 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PRINTS E-class P450 group I signature 248 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PRINTS E-class P450 group I signature 291 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PRINTS E-class P450 group I signature 110 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 PRINTS E-class P450 group I signature 380 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4135g00039 445 SUPERFAMILY Cytochrome P450 2 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00039 Pral-Chr4135 337924 347910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00039 1 439 Cytochrome P450 AT5G07990 40.807 2.04e-109 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00039 K20623 - gmx:100791502 583.563