Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00037 ATGCCCTGCAAAACCTTCCTACTTGGCTGTTTCAAGGCCAAGAATATTAATAACCCAACCTCTGATCCAACTCTTGTCTCCAAAAAGCCACTCTCCAGGAGACTGTCCCTCTCTGATTTGAGCAATGTTTCTTCAATCTCTATCGTGAGTGATTTGTCCAACTCTGTTCTTGGACCAAATCTTCATATTTTCACCTACAAGGAGCTCCAAGAGATCACCAACAACTTCAGCAGCAGCAGTGTTCTTGGAGAAGGTGGGTTCGGCAAGGTGTATAAAGGCTTCATTGATGACAAGCTTAGGCCTGGGTTAAAACCTCAAGTTGTGGCAGTTAAGGCTTTAGACTTAGATGGGAAACAAGGCCATAGGGAGTGGTTGGCGGAAGTAATATTTCTGGGGCAGTTGAAGCATCCCAATCTGGTGAACTTAATCGGGTATTGCTGTGAAGACAAAAACAGGCTACTGGTATACGAATACATGGAAAGGGGCAATTTAGAGGACAAGCTTTTCAAAGGCTATTTAGCAGCCTTGCCATGGTTAACAAGAATCAAAATAGCGATTGGGGCAGCAAAAGGTCTTGCTTTTCTTCACGAAGAAGAGAAACCAGTCATATACAGAGATGTTAAAGCCTCAAACATACTATTAGATGCCGATTACAATGCTAAACTCTCTGATTTTGGGCTAGCAATAGACGGTCCAGACGAGGATCAAAGCCACATCACAACTCGAGTTATGGGTACCCACGGCTATGCTGCTCCTGAGTATATTATGACAGGACATTTAACAACAATGAGCGATGTGTACAGCTATGGGGTGGTTCTTTTAGAGCTACTTACAGGAAAGAGATCTGTGGATAAGAATCGACCTCCGAGAGAGCAGGATTTAGTAGTATGGGCAAGGCCTCTTCTGAAAGATAACCAGAAACTAGAAAGGATAATGGATCCAAGACTGGAGGGTCAATACTCCAGTGAAGGAGCCAGAAAGGTGGCTGCTTTGGTTCACCGATGTCTGAGTCATCAGGCCAAGACTCGACCATCAATGCGCGCAGTGGTCAAGTCATTAGAGTCTATCATGAACCTCACCGACATTCCACAAGGCCACTTTGTATACGTCGTTCCTAACGAGGGTGAACTGGAAGGTTGGATACAAAGTAAAATTGAAAAAGGAGGCAAGACCGAGAACAGAGAGCAGAAGGTGGAGACGAAGGAGAAGGGCCGGCCGAGGAATAGGAAAAATCGAAGACGTAAACGACGGATTAGACCCCTCAGGTCTCGTGCCGTTTACACTGATACGACATTGTATAAATCTCTTGGTTCTAGCTTGTACAATCAAATTAGTGTGATAAATTGA 1347 0.4454 MPCKTFLLGCFKAKNINNPTSDPTLVSKKPLSRRLSLSDLSNVSSISIVSDLSNSVLGPNLHIFTYKELQEITNNFSSSSVLGEGGFGKVYKGFIDDKLRPGLKPQVVAVKALDLDGKQGHREWLAEVIFLGQLKHPNLVNLIGYCCEDKNRLLVYEYMERGNLEDKLFKGYLAALPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPDEDQSHITTRVMGTHGYAAPEYIMTGHLTTMSDVYSYGVVLLELLTGKRSVDKNRPPREQDLVVWARPLLKDNQKLERIMDPRLEGQYSSEGARKVAALVHRCLSHQAKTRPSMRAVVKSLESIMNLTDIPQGHFVYVVPNEGELEGWIQSKIEKGGKTENREQKVETKEKGRPRNRKNRRRKRRIRPLRSRAVYTDTTLYKSLGSSLYNQISVIN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00037 448 Gene3D Transferase(Phosphotransferase) domain 1 159 365 - -
Pral4135g00037 448 PANTHER OS01G0588500 PROTEIN-RELATED 46 356 - -
Pral4135g00037 448 FunFam Serine/threonine-protein kinase BIK1 43 158 - -
Pral4135g00037 448 ProSiteProfiles Protein kinase domain profile. 76 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4135g00037 448 MobiDBLite consensus disorder prediction 384 405 - -
Pral4135g00037 448 ProSitePatterns Protein kinases ATP-binding region signature. 82 111 IPR017441 GO:0005524
Pral4135g00037 448 FunFam Serine/threonine-protein kinase PBS1 159 367 - -
Pral4135g00037 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Pral4135g00037 448 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Pral4135g00037 448 CDD STKc_IRAK 82 356 - -
Pral4135g00037 448 MobiDBLite consensus disorder prediction 406 421 - -
Pral4135g00037 448 Pfam Protein tyrosine and serine/threonine kinase 79 353 IPR001245 GO:0004672|GO:0006468
Pral4135g00037 448 SMART serkin_6 76 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4135g00037 448 SUPERFAMILY Protein kinase-like (PK-like) 52 354 IPR011009 -
Pral4135g00037 448 MobiDBLite consensus disorder prediction 384 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00037 Pral-Chr4135 321237 323311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00037 62 353 Glycoside Hydrolase AT3G07070 51.525 8.52e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral4135g00037 PK_Tyr_Ser-Thr 4.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00037 - - gmx:100790454 596.66