Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00035 ATGATAAGCGAAACAAGTGCAAGAAATGGATCTCCTTTCACAGCAATTCAATGGCAAGAACTTGAACATCAAGCTCTTATCTTTAAATACCTGTTCTCAGGGAGCCCCATCCCACCTGATCTCATTTACTCTGTCAGAAGAAGCCTTGACTCTTCAATGTCTTCTTCTTCTTCTTCAAGGCTCTTCCCCTTCCATCCAATTGGATGGGGATGCCTAGAAATGGGATATGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAAGAAGCCTATCCGGACTCAAAATACTGTGAGAGGCACATGCACAGGGGGAAAAACCGTTCAAGAAAGCCTGTGGAAATTTCTTCAACAGCAACAACAGGCATTTCAACAAACACATCACAGCCAATCTCTTCACCGTATAGCAACAGAAGCCTTACCATGAGCAATGCCAATCCACCGTCAACAACTTCTTTCCCTTTCTCTCTATTGCCCTCTTCTGTGCCCTCCGATACCCAACCTTATTCCCATGTTTACCAAAATTCTTCTCTTAATCCCTTGTACTACACCCATTCAACCTCATGTAAACCTCTTGATTCTGATTTTCCTTCTCCAAAAAGCAATGCCCACCAGCTATTTTTGGACTCTGGACCTTATTCTAGGGATGAGGACTATAGGCATACTCATGGAATGAGGGAAGGTGTGGATGAGAGAGCTTTCTTTCCAGAAGCCTCGGGGAGTGTTAGGAGCTTTCCTGATTCATATCAACAATTACCATTGAGCTCCTGTAAGTCTTATTCAAACTCCCAGTTCCATAACATGAATGATAATCCAACTCCAAGACAGCAAGAAGAGCAACATTGCTTTGTCATGGAAAGAGACTTCAACTCACCGGGGCAAATAAAACAAGAGAATGAAACCGAGATGACCCAGAGATCCCTTCATCATTTCTTTGGTGAATGGCCTCCAAAGAACACAGATTCCTGGCTTGATCTCGCTTCAAATTCCAGAATCCCCTCTGGTAATGTTTTATTATCTGTAGCTTCCTCTTCGTTGTATCTGACGTCTTAA 1083 0.434 MISETSARNGSPFTAIQWQELEHQALIFKYLFSGSPIPPDLIYSVRRSLDSSMSSSSSSRLFPFHPIGWGCLEMGYGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEISSTATTGISTNTSQPISSPYSNRSLTMSNANPPSTTSFPFSLLPSSVPSDTQPYSHVYQNSSLNPLYYTHSTSCKPLDSDFPSPKSNAHQLFLDSGPYSRDEDYRHTHGMREGVDERAFFPEASGSVRSFPDSYQQLPLSSCKSYSNSQFHNMNDNPTPRQQEEQHCFVMERDFNSPGQIKQENETEMTQRSLHHFFGEWPPKNTDSWLDLASNSRIPSGNVLLSVASSSLYLTS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00035 360 MobiDBLite consensus disorder prediction 122 158 - -
Pral4135g00035 360 ProSiteProfiles WRC domain profile. 81 125 IPR014977 -
Pral4135g00035 360 Pfam WRC 82 124 IPR014977 -
Pral4135g00035 360 Pfam QLQ 12 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4135g00035 360 ProSiteProfiles QLQ domain profile. 12 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4135g00035 360 SMART QLQ_2 11 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral4135g00035 360 PANTHER GROWTH-REGULATING FACTOR 5 11 335 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pral4135g00035 360 MobiDBLite consensus disorder prediction 112 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00035 Pral-Chr4135 300547 301802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00035 12 124 GRF Transcription Factor Family AT3G13960 69.912 9.95e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pral4135g00035 WRC 7.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00035 - - pcin:129287482 564.688