Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00032 ATGGCTTGTAGGACTGATGATAATAAGAGCAAAGTGAAAAATGAAACCATGAAGAACGGAGCTGTCAGCAAGGGAGCTTGGACACCGGAGGAAGATAGGAAACTAGCTGAGGTTATTGAAGTTCATGGGGCCAAGAAGTGGAAGTCCATCGCTGCCAAAGCGGGCCTTAATCGTGCTGGTAAGAGTTGTAGGCTGAGATGGTTGAACTATCTTAGACCCAACATCAAGAGAGGAAACATATCAGAACAAGAAGAGGATTTGATACTTCGACTTCACAAACTCCTTGGAAACAGATGGTCTTTAATCGCCGGAAGGCTGCCGGGAAGAACGGACAATGAGATAAAGAACTACTGGAATTCTCACTTGTGCAAGAAGATAAAACAGAGGGAGCAGCAATCAAGTGGGAGTTCAATCAGACAAGAGAACCAAAGAGTGGTTTTGGAGGAAGCAGTTCCTGAAGAGAATTCTACAGTGCGAGCTGATGATGAAGCCGCATCAAAAGAACCCGATGTTGATAATGTGGATGGGTTCTTTGACTTGTCCAATGAAGAAGTTCAATTTAATCTGGAGTGGGTTAATCAATTCCTTGAACTAGACGATGCCACTCTTGGACTCTTCTCACAATAA 627 0.4386 MACRTDDNKSKVKNETMKNGAVSKGAWTPEEDRKLAEVIEVHGAKKWKSIAAKAGLNRAGKSCRLRWLNYLRPNIKRGNISEQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKIKQREQQSSGSSIRQENQRVVLEEAVPEENSTVRADDEAASKEPDVDNVDGFFDLSNEEVQFNLEWVNQFLELDDATLGLFSQ 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00032 208 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 18 155 - -
Pral4135g00032 208 CDD SANT 81 122 IPR001005 -
Pral4135g00032 208 FunFam MYB-related transcription factor 23 76 - -
Pral4135g00032 208 Gene3D - 80 149 - -
Pral4135g00032 208 MobiDBLite consensus disorder prediction 1 26 - -
Pral4135g00032 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 71 IPR017930 -
Pral4135g00032 208 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Pral4135g00032 208 Pfam Myb-like DNA-binding domain 77 122 IPR001005 -
Pral4135g00032 208 Gene3D - 24 76 - -
Pral4135g00032 208 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Pral4135g00032 208 CDD SANT 26 71 IPR001005 -
Pral4135g00032 208 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Pral4135g00032 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Pral4135g00032 208 SUPERFAMILY Homeodomain-like 23 118 IPR009057 -
Pral4135g00032 208 SMART sant 76 124 IPR001005 -
Pral4135g00032 208 SMART sant 23 73 IPR001005 -
Pral4135g00032 208 FunFam Transcription factor TT2 80 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00032 Pral-Chr4135 259270 260432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00032 1 138 MYB Transcription Factor Family AT5G52600 57.971 7.41e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4135g00032 Myb_DNA-binding 7.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00032 K09422 - qsa:O6P43_018373 253.062