Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00010 ATGTTGACCTGCATTGCGTGTTCCAAGCAGCTTAATGACAAGAGATCTCTTCCCCAACAAGATGAGCACGAAGAAGCTGTGGATACACCCAGCACCAAGCAGGCCATTAAGGCCCTCACAGCGCAGATCAAGGACATGGCGGTGAAGGCTTCTGGGGCATATAGAAATTGCAAGCCTTGTTCAGGATCTTCAAATGGTAACAGGAACCATAACTATGCTGATTCTGATATGGCTTCAGAATCAGCGAGATTTCACTGGGCGTACAAAAGGACTGGTAGCTCCAACTCAACCCCCAGGCTTTGGGGAAAGGAGATGGAGGCGAGACTGAAGGGGCTCTCTAGTGGGGAAGGAACGCCGGCGTCGGTGAGTGGCCGGACTGAGTCGGTGGTGTTCATGGAGGAGGATGAGCCCAAGGAATGGGTTGCTCAAGTAGAGCCTGGTGTGCTTATCACTTTCGTTTCGTTGCCTCAAGGTGGGAATGATCTGAAACGAATACGGTTCAGCCGGGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCTGAGAATTATGACAAGGTCATGGAGTTATACAACGTTCAAAGGTTCAATGAACAAGTAGGTCCTCTGCCAACCCCACCGAGATCCGAGGATGAGAGCTCGAAGATTGAATCTGTTAGGGACAGCCCTGTCACGCCTCCTCTTAACAAAGAGCGTCCACCCCATCATCTTCTTCACCGCCAAATGGGAATGGGATACTCTTCATCGGATTCACTGGATCTTCACCACACAATGCTACAACGCCCATGCTATGAAACAAGTGGCTTAGCTTCGACACCTAAACTTTCTGGCATCAGTGGAGCAAAGACTGAAACATCATCCTTAGATGGTTCTGTGAGGACTAGTTCATCAAGAGAGGGAGACCAGTCGGGTGAGCTTTCACTCAGCAATGCCAGTGATATGGAGACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACCATCAGAGCACTGCCAGGGGGTGCCAGAGAACTCAGGCGTGTCCGGTTCAGCCGAGAAAGGTTTGGAGAAATGCACGCGAGGTTGTGGTGGGAGGAGAACCGGGCAAGGATACAGGAGCAATATTTGTGA 1119 0.5031 MLTCIACSKQLNDKRSLPQQDEHEEAVDTPSTKQAIKALTAQIKDMAVKASGAYRNCKPCSGSSNGNRNHNYADSDMASESARFHWAYKRTGSSNSTPRLWGKEMEARLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNEQVGPLPTPPRSEDESSKIESVRDSPVTPPLNKERPPHHLLHRQMGMGYSSSDSLDLHHTMLQRPCYETSGLASTPKLSGISGAKTETSSLDGSVRTSSSREGDQSGELSLSNASDMETEWVEQDEPGVYITIRALPGGARELRRVRFSRERFGEMHARLWWEENRARIQEQYL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00010 372 MobiDBLite consensus disorder prediction 271 316 - -
Pral4135g00010 372 MobiDBLite consensus disorder prediction 200 235 - -
Pral4135g00010 372 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 372 IPR044532 -
Pral4135g00010 372 ProSiteProfiles BRX domain profile. 317 372 IPR013591 -
Pral4135g00010 372 Pfam Transcription factor BRX N-terminal domain 24 60 IPR027988 -
Pral4135g00010 372 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Pral4135g00010 372 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Pral4135g00010 372 Pfam Transcription factor regulating root and shoot growth via Pin3 316 371 IPR013591 -
Pral4135g00010 372 MobiDBLite consensus disorder prediction 271 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00010 Pral-Chr4135 102735 106850 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00010 1 372 Major Intrinsic Protein MIP AT1G31880 47.059 2.69e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00010 - - cave:132186704 627.861