Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00009 ATGGCCCTTCTTGCTGCTTCATCCTCTTCCTCTGCTCAATCCGTTCCGAAGAAGAATGATGTGTTCATCAGCTTTAGGGGTGAGGACACTCGCTCCAACTTCACCAGCCATCTTTATGATGCTTTCTGCAGAAAACAAATTAGAACCTACATAGACTACCAACTCGTGAAAGGAGATGAGATCTCACCATCACTTCTGCAAGCTATCAAGGATTCATATGTATCAGTGGTGGTGTTCTCTGCAAATTATCCTTCTTCAAGATGGTGCTTGGATGAACTCGTCCATATACTCCATTGCAAAAGGGTTCAAGGACAGATTGTTATTCCTGTCTTCTATAGAGTCGACCCATCTCATGTACGCAATCAGACTGGGGTTTACAAGCAAGCATTTGAGAATTATGAGAGAGATGTCAAGTTTGACCAACACAAGATGCAAATGTGGAAGCAAGCTCTTCATGAAGCTGCAAACTTAGCTGGTTATGACTCTGACACGTTCAGGGATGAATCCGAATTGATTCAAAAGATTGCCAAAGACATATTGCAGAAACTGAATCACAAGTACCCCCCAGCTGAAATAAAAGGACTCATAGGCATTGAGGACAACTGCGCAGAGATTGAATTATTGTTGAAAGATGCCAAAACAAAAACCATTGGAATATGGGGCATGGGGGGTATCGGCAAGTCAACCATTGCCCAAACTATATTTTTAAAACATTCTTCCCATTATGATTATTCTTGCTTCTTTGAAGCTGTAAGAGAAGAGTCTAAAAATGGAAATACTGAATTACGCCGTAAATTTCTCTCCCGTCTGCTAGGGGATGATTCCGTTATTGATACTTCAACCTCTTTTCTTGAGTCGAGGCTTAGTCGTATGAGGGTTTTTGTTGTTCTTGATGATATCAGTACAGTGGAGCAATTAGAATGTTTGGTTGGAAAACCTTTTTGCTTTGGGCAAGGAAGTAAAATTCTCATCACAACAAGGGACAAGCATGCGCTCAGCAAAGGAGTTGACGCATTATATGAGGTTAAGAAATTGGACTTCCATCAATCCCTTGAACTTTTCAGCTTGAATGCCTTCAGCACTAGCTTGCCTATAATGGGATATGGAGAACTAACAAAAACGGCAGTTGTTTATGCACAAGGAATTCCATTGGCTTTAAAAGTTTTGGGTTCATATCTTCGTGGTAGAAATCAAGTTGAGTGGGAGAGTGCTTTGAAAAAACTGAAGAAGAATCCTTATCAAGAAATTCAGAATGTGTTGAGATTGAGTTACGATGAGCTGGATGACGAGGAGAAGAAAATATTTCTAGACATTGCTTGCTTTTTAAAGGGAGAGTTGACAGAGTTGGTAATCAGCTTATTAGATAGCTTTGGCTTCTGCGGAGCTATCGGCATAAGAACACTCCATGACAAGGCCCTCATAAATGTGGATGGCAGTATCCATGTGGAAATGCATGATTTGATCCAAGAAATGGGTTTGCAAATAGCTCGTGAAGAGTCCATCAATGAACCAGGAGGACGTAGACGTTTATGTGATTCAGAGGAAATTTATGATGTATTAGCTAATAATATGGGATCAAAGCAAGTTGAAGGAATAAAGTTGAATGTTTCTCAAATTAGAGATCTACATTTGGAAGCCGAGGTTTTCGAGAGAATGCCAAATATAAGACTCGTCAAATTTTATTCAACTTCCTATCGTGGCTCAAGTCATGTGCACCTTCCAGAAGGTCTCAAATTTCTTCCCAATCAGATGAGGTATCTAGAGTGGTATGGATTCCCACTTAAATCTCTGCCCTCCACTTTTTGTCCTAAAAAGCTTGTTAAGCTCTGCATGCCCGATAGCCATATTCAAAAGCTTTGGAGCGGAGTGCAAGAGTTTGTGAGCTTACAAGAGATAGACCTTAGTGGTTCCAAACAACTACAAGAGCTGCCCAATCTCTCTAAATGCTTGAATCTCAAAGCGGTACAACTTGCGCGATGCGAAAGTTTGTGCTCTGTTCATTCCTCAATCTTGTCTCTCCACTCGCTTGTTGAGTTGAACTTATTTAAGTGCAAGAAACTTGGGAGTCTAAAAAGTTTACATTTAAGATCTCTACAACATATCGAGGTGATGGGGTGCTGGAATCTCAAGGAGTTCTCAGTGTCATCGGATCAACTGAGAATATTGAATTTAGAATCAACAGGAATTGAAATCTTGCACTCGTCTGTAGCGAGTTCAAGTAAATTGGAAGAGATGATTCTTGGTGGATCAAGACTTGTGAACCTTCCTAACCAATTATCTTGCTTGACAAGTTTGACGACTCTTGCGCTTCAGAACTGTGAAATCATTGATGATTTGAAGCTACATATCTTTTTTGATAGCATGTTGTCTTTAAGAGAAGTGGAGCTGGTTGGGTGCGGTAACATAATTGACCTGCCCAGTAACTCTAAGCATCTTTCAGGATTGGAAATGCTTATTGTACGGGATTGTAAGAGGCTTCGTTCTTTACCAGAACTCCCTCCATCCATTGCAACCCTGTGTGCCGATTATTGCAAGTCATTGGAAATTGTGTCAACTTGTAGACCATCAAGTGGTGGCCCACTAGACTTCTCATTCCAGAACTGTGGGCAACTGAATGAACAATCGCTTCGCAATATCATGGAGGCTGCTGTCTATTCTATGACTTATCATTTATTGCCTAAAAATAAGAACTACAGAGCTTGTCGTTCGATTCGTGTTTCCGGAAGCAGAGTACCAGAGTGGATCAAATACAGGGCAGCACAAAGCTCCATAACTATTGAACTCTCTCAAATTTCAGACTTAACGAGTTTCTTCTTCTGCATTGTACTTGATGTTCACTCAGAAATTAACTGTGAAAGTCAATACTTGACGTGCAAATGCTACGTGGAAGGTTTGCATACGGTAGATTCAGGGTTTGTAGCGCTTTTTGGAGATATGAAATCTGATGATGTTTTTATATGGAATGATGGCTTAGCAGATAAAAGGATAGTGAATGAAATTAGAAGAAGAAATCAACAGTTGTTCACTAACATAAAGCTTCGCTTCGAATTCTCTGTTGGACCCAAGTTAATGATCAAAGAATGCGGGGTGGGGCCAGTATCTGTCTCAGCATGTCAGAAATTTGTTCAGGAAATGGAAACAGGGAGGAAAAGGAAGAGGCCTCCCGGTGTTGAAGAGCAGCAACCAACCATCGCCTCACTTGAAAAAAATGGAGTTTGA 3219 0.4073 MALLAASSSSSAQSVPKKNDVFISFRGEDTRSNFTSHLYDAFCRKQIRTYIDYQLVKGDEISPSLLQAIKDSYVSVVVFSANYPSSRWCLDELVHILHCKRVQGQIVIPVFYRVDPSHVRNQTGVYKQAFENYERDVKFDQHKMQMWKQALHEAANLAGYDSDTFRDESELIQKIAKDILQKLNHKYPPAEIKGLIGIEDNCAEIELLLKDAKTKTIGIWGMGGIGKSTIAQTIFLKHSSHYDYSCFFEAVREESKNGNTELRRKFLSRLLGDDSVIDTSTSFLESRLSRMRVFVVLDDISTVEQLECLVGKPFCFGQGSKILITTRDKHALSKGVDALYEVKKLDFHQSLELFSLNAFSTSLPIMGYGELTKTAVVYAQGIPLALKVLGSYLRGRNQVEWESALKKLKKNPYQEIQNVLRLSYDELDDEEKKIFLDIACFLKGELTELVISLLDSFGFCGAIGIRTLHDKALINVDGSIHVEMHDLIQEMGLQIAREESINEPGGRRRLCDSEEIYDVLANNMGSKQVEGIKLNVSQIRDLHLEAEVFERMPNIRLVKFYSTSYRGSSHVHLPEGLKFLPNQMRYLEWYGFPLKSLPSTFCPKKLVKLCMPDSHIQKLWSGVQEFVSLQEIDLSGSKQLQELPNLSKCLNLKAVQLARCESLCSVHSSILSLHSLVELNLFKCKKLGSLKSLHLRSLQHIEVMGCWNLKEFSVSSDQLRILNLESTGIEILHSSVASSSKLEEMILGGSRLVNLPNQLSCLTSLTTLALQNCEIIDDLKLHIFFDSMLSLREVELVGCGNIIDLPSNSKHLSGLEMLIVRDCKRLRSLPELPPSIATLCADYCKSLEIVSTCRPSSGGPLDFSFQNCGQLNEQSLRNIMEAAVYSMTYHLLPKNKNYRACRSIRVSGSRVPEWIKYRAAQSSITIELSQISDLTSFFFCIVLDVHSEINCESQYLTCKCYVEGLHTVDSGFVALFGDMKSDDVFIWNDGLADKRIVNEIRRRNQQLFTNIKLRFEFSVGPKLMIKECGVGPVSVSACQKFVQEMETGRKRKRPPGVEEQQPTIASLEKNGV 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00009 1072 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Pral4135g00009 1072 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Pral4135g00009 1072 Pfam NB-ARC domain 207 426 IPR002182 GO:0043531
Pral4135g00009 1072 SUPERFAMILY L domain-like 484 880 - -
Pral4135g00009 1072 Gene3D Ribonuclease Inhibitor 694 849 IPR032675 -
Pral4135g00009 1072 Gene3D Ribonuclease Inhibitor 520 693 IPR032675 -
Pral4135g00009 1072 PRINTS Disease resistance protein signature 379 393 - -
Pral4135g00009 1072 PRINTS Disease resistance protein signature 624 640 - -
Pral4135g00009 1072 PRINTS Disease resistance protein signature 216 231 - -
Pral4135g00009 1072 PRINTS Disease resistance protein signature 287 301 - -
Pral4135g00009 1072 Gene3D - 345 428 IPR042197 -
Pral4135g00009 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 438 IPR027417 -
Pral4135g00009 1072 SMART till_3 18 157 IPR000157 GO:0007165
Pral4135g00009 1072 Pfam TIR domain 20 189 IPR000157 GO:0007165
Pral4135g00009 1072 Gene3D - 181 338 IPR027417 -
Pral4135g00009 1072 Pfam C-JID domain 907 1030 IPR045344 -
Pral4135g00009 1072 Gene3D - 16 180 IPR035897 -
Pral4135g00009 1072 Pfam Leucine Rich Repeat 605 624 IPR011713 -
Pral4135g00009 1072 MobiDBLite consensus disorder prediction 1046 1072 - -
Pral4135g00009 1072 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 185 - -
Pral4135g00009 1072 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 713 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00009 Pral-Chr4135 80178 83859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00009 14 852 WRKY Transcription Factor Family AT4G12020 33.604 6.51e-107 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00009 - - pcin:129288061 1180.24