Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00007 ATGGCCCTTCTTGCTGCTTCATCCTCTTCCTCTGCTCAATCCGTCCCCAAGAAGAATGATGTTTTCATCAGCTTTAGGGGTGAGGACACTCGCTCCAACTTCACCAGCCATCTTTATGATGCTTTCTGCAGAAAACAAATCAGAACCTACATAGACTACCAACTCGTGAAAGGAGATGAGATCTCACCATCACTTCTGCAAGCTATCGAGGATTCATATGTATCAGTGGTGGTGTTATCTGAAAATTATGCTTCTTCAAGATGGTGCTTGGATGAACTCATCCATATACTCCATTGCAAAAGAGTTCAAGGACAGATTGTTATTCCTGTCTTCTATAAAGTCGACCCATCTCATGTACGCAAGCAGACTGGCCTTTACAAGCAAGCATTTGAGAGATATGAGGGAGATCTCAAGGTTGACCACCACAAGATGCAAATGTGGAAGCAAGCTCTTAATGAAACTGCAAACTTAGCTGGTTATGACTCTCACACATTTAGGGATGAATCCGAATTGATTCAAAAGATTGCCAAAGACATACTGCAGAAACTGAATCACAAGTACCCCCCAGCTGAAATAAAAGGACTCATAGGCATTGAGGACAACTGCGCAGAGATTGAATTATTGTTGAAAGATGCCAAAACAAAAACCATTGGAATATGGGGCATGGGGGGTATCGGCAAGTCAACCATTGCCAAAACTATATTTTTAAAATATTCTTCCCATTATGATTATTCTTGCTTCTTGGAAAATGTAAGAGGAAGGTCTAACAATGAACTTACTAAATTACGCGCTGAATTTTTCTCTTGTTTGCTAAGGGATGATTTCTCTCTCGATACTTCAACCTCTTTTCTTGCGTCAAGGCTTAGTCATACGAAGGTTTTTGTTGTTCTTGATGATATCAGTACGGTGGGGCAATTAGAAGATTTGGTTGGAGAACCTTTTTGCTTTGGGTTAGGAAGTAAAATTCTCATCACAACAAGGGACAAGCATGTGCTCAGCAAAGGAGTTGACGCAATATATGAGGTTAAGAAATTGGACTTCCATCAATCCCTTGAACTTTTCAGCTTGAATGCCTTCAGCACTAGCCTGCCTATAATGGGATATGAAGAACTAACAAAAACGGCAGTTTTTTATGCACAAGGAATTCCATTGGCTTTAAAAGTTTTGGGTTCATATCTTCGTGGTAAAAGTGAAGTTGAATGGAAGAGTTCTTTAAAAAAACTGAAGAAGAGTCCTCATAAAGAGATTCAAAATGTGTTGAGATTGAGTTATGATGAATTGGATGACAAGGAGAAAAACATACTTCTAGACATTGCTTGCTTTTTAAATGGAGAGTTGACGGAATTGGTAATCAATTTATTAGACAACTTTGGCTTCTATGGAGCTATCGGCATAAGAACACTCCATGACAAGGCCCTCATAAATGCGGGTGACGGTTTGCGTGTGGAAATGCATGATTTGATCCAAGAAATGGGTTTGCAAATAGCTCGTGAAGAGTCTACTGAAGAACCAGAAAGACGTAGACGTTTATGGGATTCAGAGGAAATTTATGATGTATTGACTAGTAATATGGGATCAAAGAAAGTTGAAGCAATAAAGTTAGATGTTTCTCAAGTTAAAGATCTATATTTGAAAACTGACGTTTTTAGGAAGATGCCTAATATGAGATTTCTTAGATTTTATTCTTCTTCTTGGTGGTCTAGCTCAAGCCATGTGCACCTTCCAGAAGGTCTCAATTTTCTTCCTAATAAGATGAGGTATCTAGAGTGGCATGGATTCGCTCTTAAATCTCCGAGGTCCACTTTTTGTCCTGAAAAACTTGTTAAGCTGTACCTACCCTGTAGCCATTTGCAAAAGCTTTGGAACGGAGTGCAGGATTTGGTGAGCTTACAAGAGATAGACCTTAGTTGGTCTGTACAACTACAAGAGCTGCCAAATCTCTCCAAATGCTTGAATCTCAAAGTGGTACAACTTCGTGGATGCCGGAGTTTGTGCTCTGTTCATTCCTCAATCTTGTCTCTCCACTCGCTTGTTGAGTTGGACTTAAGTCGGTGCGTGAAACTTAGAAGTCTAAAAAATGAGTTACATTTAAGATCTCTACAACATATCTATGTGTTAGGGTGCTCGAATCTCAAGGAGTTCTCAGTGTCATCGGATGAACTGAGAGAATTGGATTTAATTGACACAGGAATTGAAACCTTGCGCTCGTCTGTAGCGCGTTCAAGTAAATTGGAACATCTCGGTTTTAGGGGCTCAAGACTTGTGAAACTTCCTGACCAATTATCTTGCTTGACAAGTTTGACGGTTCTTCATCTTCAAAACTGCGAAACCATTGATGATTTGAAGCTACATAACTTTTTTGATGGCATGTTGTCTTTAAAACACGTGGACCTGATTAAGTGCCGTAACATAACTGAACTACCTAATAATACTAAGCGTCTTTTAGGATTGGAATGGCTTAGAGTATGGAATTGTAGAAGGCTTCGTTCTTTACCAGAACTCCCACCATCCATTGACTGCCTAATTGCTCGTGGTTGCAAGTCGTTGGAAATTGTGTCAACTTGTAGACCATCAAGTGGTCGCCCGATATGCTTCTTTTTCGACAATTGTGTGCAACTGAATGAACAATCGTTTCACAATATCATGGAGGCTGCTGCCTATTCTATACCTTATTATTTATTGTATAAAAATAAGGATGACTGGCGTCGTTATAGGATTTGTGTTCCCGGTAGCAGAGTACCAGAGTGGATCAAATACTGGGCAGCACAAAGCTCCGTAACTGTTGAACTCTCTCAAATTTCAGGCTTAGCGGATTTCTTCTTCTGCATTGTACTTGATGTTCACTCAGAAATTAACTGTCTAGCTCAAGGTTTGATGTGCACATGCCACTCGGAAGGTTTTGATGTGACATATTCATTACTTGGCAATGTGGTTCTTCGAGATAGGAAATCTGATTATGTTTTTATATGGAATGGTGATGGTGACTTAACAAGTAAAAGGATAGTTGATGAAATTAGAAGAAGAAATCAACAGTCGTTCACTAACATAAAGCTTTGCTTTGAATTCTCTGCTGGACCTCGTTGGTCTCACGAGTCAATGACCGGTGAAAGCAAGTTAATGATCAAAGAATGCGGGGTGTGGCCAGTATATGTCTCAGAATGTCAGAAATTTGTTGAGCAAATGGAAATAGGGAGGAAAAGGAAGAGGCCTCACGATGTTGAAGAGCAACAACCACCGCCTCACTTAAAAAAAAAGGAGTTTGATGAGGGTACACATCCCAGCACTTAA 3288 0.3993 MALLAASSSSSAQSVPKKNDVFISFRGEDTRSNFTSHLYDAFCRKQIRTYIDYQLVKGDEISPSLLQAIEDSYVSVVVLSENYASSRWCLDELIHILHCKRVQGQIVIPVFYKVDPSHVRKQTGLYKQAFERYEGDLKVDHHKMQMWKQALNETANLAGYDSHTFRDESELIQKIAKDILQKLNHKYPPAEIKGLIGIEDNCAEIELLLKDAKTKTIGIWGMGGIGKSTIAKTIFLKYSSHYDYSCFLENVRGRSNNELTKLRAEFFSCLLRDDFSLDTSTSFLASRLSHTKVFVVLDDISTVGQLEDLVGEPFCFGLGSKILITTRDKHVLSKGVDAIYEVKKLDFHQSLELFSLNAFSTSLPIMGYEELTKTAVFYAQGIPLALKVLGSYLRGKSEVEWKSSLKKLKKSPHKEIQNVLRLSYDELDDKEKNILLDIACFLNGELTELVINLLDNFGFYGAIGIRTLHDKALINAGDGLRVEMHDLIQEMGLQIAREESTEEPERRRRLWDSEEIYDVLTSNMGSKKVEAIKLDVSQVKDLYLKTDVFRKMPNMRFLRFYSSSWWSSSSHVHLPEGLNFLPNKMRYLEWHGFALKSPRSTFCPEKLVKLYLPCSHLQKLWNGVQDLVSLQEIDLSWSVQLQELPNLSKCLNLKVVQLRGCRSLCSVHSSILSLHSLVELDLSRCVKLRSLKNELHLRSLQHIYVLGCSNLKEFSVSSDELRELDLIDTGIETLRSSVARSSKLEHLGFRGSRLVKLPDQLSCLTSLTVLHLQNCETIDDLKLHNFFDGMLSLKHVDLIKCRNITELPNNTKRLLGLEWLRVWNCRRLRSLPELPPSIDCLIARGCKSLEIVSTCRPSSGRPICFFFDNCVQLNEQSFHNIMEAAAYSIPYYLLYKNKDDWRRYRICVPGSRVPEWIKYWAAQSSVTVELSQISGLADFFFCIVLDVHSEINCLAQGLMCTCHSEGFDVTYSLLGNVVLRDRKSDYVFIWNGDGDLTSKRIVDEIRRRNQQSFTNIKLCFEFSAGPRWSHESMTGESKLMIKECGVWPVYVSECQKFVEQMEIGRKRKRPHDVEEQQPPPHLKKKEFDEGTHPST 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00007 1095 MobiDBLite consensus disorder prediction 1065 1095 - -
Pral4135g00007 1095 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 185 - -
Pral4135g00007 1095 Pfam C-JID domain 908 1053 IPR045344 -
Pral4135g00007 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 438 IPR027417 -
Pral4135g00007 1095 Gene3D - 16 181 IPR035897 -
Pral4135g00007 1095 Pfam Leucine Rich Repeat 606 625 IPR011713 -
Pral4135g00007 1095 Pfam NB-ARC domain 207 426 IPR002182 GO:0043531
Pral4135g00007 1095 Gene3D - 345 428 IPR042197 -
Pral4135g00007 1095 SUPERFAMILY L domain-like 484 875 - -
Pral4135g00007 1095 Pfam TIR domain 20 189 IPR000157 GO:0007165
Pral4135g00007 1095 Gene3D Ribonuclease Inhibitor 696 847 IPR032675 -
Pral4135g00007 1095 Gene3D Ribonuclease Inhibitor 517 695 IPR032675 -
Pral4135g00007 1095 SMART till_3 18 157 IPR000157 GO:0007165
Pral4135g00007 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 715 IPR044974 GO:0006952
Pral4135g00007 1095 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Pral4135g00007 1095 Gene3D - 182 340 IPR027417 -
Pral4135g00007 1095 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Pral4135g00007 1095 PRINTS Disease resistance protein signature 672 688 - -
Pral4135g00007 1095 PRINTS Disease resistance protein signature 216 231 - -
Pral4135g00007 1095 PRINTS Disease resistance protein signature 287 301 - -
Pral4135g00007 1095 PRINTS Disease resistance protein signature 379 393 - -
Pral4135g00007 1095 FunFam Disease resistance protein (TIR-NBS-LRR class) 346 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00007 Pral-Chr4135 52567 56327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00007 14 827 WRKY Transcription Factor Family AT4G12020 33.135 6.40e-100 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00007 - - pcin:129288061 1209.13