Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00006 ATGTTGACCTGCATTGCGTGTTCCAAGCAGCTTAATGACAAGAGATCTCTTCCCCAACAAGATGAGCACGAAGAAGCTGGGAATACACCCAGCACCAAGCAGGCCATTAAGGCCCTCACCGCGCAGATCAAGGACATGGCGGTGAAGGCTTCTGGGCCATATAGAAATTGCAAGCCTTGCTCAGGATCTTCAAATGGTAACAGGAACCATAACCATGCTGATTCTGATATGGCTTCAGAATCAGCGAGATTTCACTGGGCTTACAAAAGGACTGGTAGCTCCAACTCAACCCCCAGGCTTTGGGGAAAGGAGATGGAGGCATAA 324 0.4938 MLTCIACSKQLNDKRSLPQQDEHEEAGNTPSTKQAIKALTAQIKDMAVKASGPYRNCKPCSGSSNGNRNHNHADSDMASESARFHWAYKRTGSSNSTPRLWGKEMEA 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00006 107 MobiDBLite consensus disorder prediction 57 72 - -
Pral4135g00006 107 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 106 IPR044532 -
Pral4135g00006 107 MobiDBLite consensus disorder prediction 13 34 - -
Pral4135g00006 107 MobiDBLite consensus disorder prediction 51 78 - -
Pral4135g00006 107 Pfam Transcription factor BRX N-terminal domain 24 60 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00006 Pral-Chr4135 44312 44857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00006 1 98 Major Intrinsic Protein MIP AT1G31880 44.118 1.39e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00006 - - cave:132186704 160.614