Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00004 ATGGGGGGTATCGGCAAGTCAACCATTGCCAAAACTATATTTTTCAAACATTCTTCCCATTATGACAGTACTTGCTTCTTGGAAAATGTAAGGGAAAAATCTCAAAATGGAATTGATGAATTACGGCGCAAATTTCTCTCTTGTCTGCTAAAGGAAGATCTCTTTATTGATGCTTCAACCTCTTTTCTTGAGTCTAGGCTTAGTCGTATGCAATTTTTCATTGTTCTTGATGATATCAGCAGTGTGGAGCAATTGGAATATTTGGTTGGAGGACGCTTTTGCTTTGGGAAAGGAAGTAAAATTCTCATCACAACCAGAGACAAGCATGTTCTTAGCAAAGGAGTTGATGTAATATATGAGGTTAAGAAATTGAAGTTTGATCAATCCCTTAAACTTTTCTGCTTGAATGCCTTCGACGCTAGCCAGCCTTTGACGGGATATGAAAAACGAACTGACAGGGCAGTTTTTTATGCACAAGGAATTCCATTGGCTTTAAAAGTTTTGGGTTTATATCTTCATAGAAGAAGTGAAGCTGAATGGGATAGTGCTTTGAGAAAACTTGAGAAGAGTCCTCATAAAGATATCCAAAAGGTGTTAAGGTTGAGTTATGATGAACTGGATGATGAGGAGAAGAAAATATTTCTAGACATCGTGTGCTTTTTGAAGGGAGAATCGACAGAATTTGTAATCAGTTTATTAGATAGCTTTGACTTCTCTGGAGCAATTGGGATAAGAACACTTCATGACAAGGCTCTCATAAATGTGCATTATGGTATTGTACAAATGCATGATTTGATACATGAAATGGGGCTGCAAATAGTTCGTGAAGATAATGGTGAACTAGGAAAATGTAGCCGATTATGCGATTCTGAAGAAATTTACGAAGTTTTAGCTAACAATATGGATTTTGTGAGCTTACAAGAGATAGACCTTTGTGGTTCGAAACAACTACTGGAGCTGCCCGATCTCTCCAAATGCTTCAATCTCAAAGTGGTACGACTTGATGAATGCGAAAGGTGCTCGAATCTCAAGGAGTTCTCAGTATCATCTGATGAACTTAGAGAATTGGATTTAGCTGACACAGGAATTGAAATCTTGCACTCGTCTGTAGCGCGTTCAAGTAAACTGGAAGAGCTCAGGCTTGGGGGCCAAAGATTTGTGAACCTTCCCGACCAATTATCTTGCTTGACAAGTTTGACAGTTCTTTATCTTGGACACTGTGAAATTATTGATGATTCGAAGCTACATATCTTTTTTGATGGCATGTTGTCTTTAAAAGAGGTGAACCTGAATGAGTGCGGTAACATAACTGAACTCCCTAATAATACTAAGCATCTTTTAGGATTGGAATCACTTGGAATATGGAATTGTAGGAGGCTTCGTTCTTTACCAGAACTACCACCATCCATTGCACGCATAGTTGCCTTTGGTTGCCAGTCATTGGAAATTGTGTCAACTTGTAGACCATCAAGTGGTCGCCCGATATTCTTCTTTGTCGAGAATTGTGTGCAACTGAATGAACAATCGTTTCACAATATCATGGAGGCTGCTGCCTATTCTATACCTTATTATTTATTGTATAGAAATGAGGATGACTGGTGTGATTATATGATTGGTGTTCCCGGAAGCAGAGTACCAGAGTGGATCAAATACAGGGCAACAAAAAGCTCCTTAACTATTGAACTCTCTCAAATTTCAGGCTTAGCGGATTTCTTCTTCTGCATTGTTCTTGATATTCACTCAGAAATTAACTGTCCAGTTCGAGGTTTGATGTGCACATGCTACTTGGAAGATTTTGATGTGACATATTCAGTTCTTGGTAATGTGGATCTTCAAGATAGGAAATCTGATTATGTTTTTATATGGAATGGTGATGATCACTTCGGAAGTAAAAGCATAGTGGATGAAATCAGAAGAAGAAATCAACAGTTGTTCACTAACATAAAGCTTCGCTTTGAATTCTCTGCTCGATCTCGTTGGTCTCATAAGCCAATGATCGGCGAAAGCAAGTTAATGATCAAAGAATGCGGGGTGTGGCCAGTATATGTCTCAGAATGTCAGAAATTTATTGAGCAAATGGAAATAGGGAGGAAAAGGAAGAGGCCTCACGATGTTGAAGAGCAGCAACCACCGCCTCACTTTAAAAAAATGGAGTTTGATGAGGGTACACATGCCAGCAGTTAG 2184 0.3892 MGGIGKSTIAKTIFFKHSSHYDSTCFLENVREKSQNGIDELRRKFLSCLLKEDLFIDASTSFLESRLSRMQFFIVLDDISSVEQLEYLVGGRFCFGKGSKILITTRDKHVLSKGVDVIYEVKKLKFDQSLKLFCLNAFDASQPLTGYEKRTDRAVFYAQGIPLALKVLGLYLHRRSEAEWDSALRKLEKSPHKDIQKVLRLSYDELDDEEKKIFLDIVCFLKGESTEFVISLLDSFDFSGAIGIRTLHDKALINVHYGIVQMHDLIHEMGLQIVREDNGELGKCSRLCDSEEIYEVLANNMDFVSLQEIDLCGSKQLLELPDLSKCFNLKVVRLDECERCSNLKEFSVSSDELRELDLADTGIEILHSSVARSSKLEELRLGGQRFVNLPDQLSCLTSLTVLYLGHCEIIDDSKLHIFFDGMLSLKEVNLNECGNITELPNNTKHLLGLESLGIWNCRRLRSLPELPPSIARIVAFGCQSLEIVSTCRPSSGRPIFFFVENCVQLNEQSFHNIMEAAAYSIPYYLLYRNEDDWCDYMIGVPGSRVPEWIKYRATKSSLTIELSQISGLADFFFCIVLDIHSEINCPVRGLMCTCYLEDFDVTYSVLGNVDLQDRKSDYVFIWNGDDHFGSKSIVDEIRRRNQQLFTNIKLRFEFSARSRWSHKPMIGESKLMIKECGVWPVYVSECQKFIEQMEIGRKRKRPHDVEEQQPPPHFKKMEFDEGTHASS 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00004 727 Pfam C-JID domain 540 685 IPR045344 -
Pral4135g00004 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 217 IPR027417 -
Pral4135g00004 727 Gene3D Ribonuclease Inhibitor 287 477 IPR032675 -
Pral4135g00004 727 Gene3D - 1 118 IPR027417 -
Pral4135g00004 727 Gene3D - 123 207 IPR042197 -
Pral4135g00004 727 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 478 IPR044974 GO:0006952
Pral4135g00004 727 MobiDBLite consensus disorder prediction 698 727 - -
Pral4135g00004 727 PRINTS Disease resistance protein signature 66 80 - -
Pral4135g00004 727 PRINTS Disease resistance protein signature 301 317 - -
Pral4135g00004 727 PRINTS Disease resistance protein signature 158 172 - -
Pral4135g00004 727 Pfam NB-ARC domain 1 206 IPR002182 GO:0043531
Pral4135g00004 727 SUPERFAMILY L domain-like 261 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00004 Pral-Chr4135 34714 37545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00004 292 521 WRKY Transcription Factor Family AT5G45050 24.727 7.33e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00004 - - pcin:129306877 400.979