Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4135g00003 ATGGCCCTTGTTGCTGCTTCATCCTCTTCCTCTGCTCAATCCCTTCCCAAGAAGAATGATGTTTTCATCAGCTTCAGGGGTGAGGACACTCGCTCCAACTTCACTAGCCATCTTTATCATGCTTTCTGCGGAAAACAAATCAGAACCTACATAGACTACCAACTTGTGAAAGGGGATGAGATCTCACCATCACTTGTGCAAGCTATCGAGGATTCATATGTATCTGTGGCGGTGTTCTCTGAAAATTATGCTGCTTCAAGATGGTGCTTGGATGAACTCACCCATATACTCCATTGCAAAAGAGTTCAAGGACAGATTGTTATTCCTGTCTTCTATAAAGTCGACCCATCTCATGTACGCAAGCAGACTGGCCTTTACGAGCAAGCATTTGAGAGATATGAGAGAGATCTCAAGGTTGACCAACACAAGATGCAAATGTGGAAGCAAGCTCTTAATGAAACTGCAAATTTAGCTGGTTATGACTCTCACACATTTAGGGATGAATCCGAATTGATTCAAAAGATCGTCAAAGACATATTGCAGAAACTGAATCACAAGTACCCCCAAGAAGGGTCTAAAAATGGACTTACTGAATTACGCCGTAAATTTCTCTCTCGTCTGCTAAGGGATGATTCCCTTATTGATACTTCAACCTCTTTTCTTGAGTCAAGGCTTAGTCATATGAAGGTTTTTGTTGTTCTTGATGATATCAGTACGGAGGCGCAATTAGAAGAGTTGATTGGAGAACCTTTTTGCTTTGGGCCAGGAAGTAAAATTCTCATCACAACAAGGGACAAGCATGTGCTTAGCAAAGGAGTTGATGTAATATATAAGGTTAAGGAATTGAAGTTCCATCAATCCCTTGAACTTTTCAGCTTAAATGCCTTCAGCACTAGCTTGCCGATAATGGGATATGAAGAACTGACAGACAGGGCAGTTGTTTATGCACAAGGAATTCCATTGGCTTTAAAAGTCCTGGGTTCATATCTTCGTGGCAGAAGTGAGGTTGAATGGAAGAGTGCTTTAAGCAAACTTAAGAAGAGTCCTCATCCAGGTATTCAAAAGGTGTTAAGGTTGAGTTATGATGGATTGGATGATGAGGAGAAGAAAATATTTCTAGACATCGTGTGCTTTTTTAAGGGAGAACCGACAGAATTTGTAATCAGTTTATTAGATAGCTTTGGCTTCTCTGGAGCAATTGGGATAAGAATACTTCATGACAAGGCTCTTATAGAAGTCTATGATGGTTCATGTGTTGAAATGCATGATTTAATACAAGAAATGGGTTTACAAATAGTTCGTGAAGAGTCTAATGAACCTGGAAGACGTAGTCGATTATGCAATCTTGAAGAAATTTATGATGTTTTAGCTAATAACATGGGATCAAAGAAAGTTGAAGGAATAATGTTGGATGTTTCTCAAATTAAAGATGTACATTTGGAAGCTGACATTTTCAAGAAGATGCCTAATATGAGATTTCTCCAATTTTATTCTGGCAGCAGCTCAGGTCATGTGCACCTTCCAGAAGGTCTCAAATTTCTTCCTAATAAGATGAGGTATCTAGAGTGGCATGGATTCCCTCTTAAATCTCTGAGGTCCACTTTTTGTCCTGAAAAACTTGTTGAGCTCTACCTACCCCATAGCCATTTACAAAAGCTTTGGAACGGAGTGCAGGATTTTGTGAGCTTAGAAGTGATAGACCTCAGTCGTTCCAAACAACTACAAAAGCTGCCGAATCTCTCCAAATGCTTGAATCTCAAAGTGGTAAAACTTGAGAATTGCAAAAGTTTGTGCTCTGTTCATTCCTCAATTTTGTCTCTCCACTCGCTTGTTGAGTTGAACTTATATAAGTGCAAGAAACTTGAGAGGCTAAAAAGTGAGTTACATTTAAGATCTCTACAAGATATCAATGTGATGGGGTGCTGGAATCTCAAGGAGTTCTCAGTGTCCTCGGATGAACTGAGAGAATTGGATTTAGAATCAACAGGAATTGAAATCTTGCACTCGTCTGAAGCGCGTTCAAGTAAATTGGAAGAGCTCAATCTTAGAGGCTCAAGACTTGTGAACCTTCCTGACCAGTTATCTTGCTTGACAAGTTTGACGGTTCTTAATCTTGAACACTGTGAAATCATTGATGATTTGAAGCTACATATCTTTTTTGATGGCATGTTGTCTTTAAAAGCAGTGTACCTGCTTGAGTGCGGTAACATAATTGAACTCCCTAATAATACTAAGCATCTTCTAGGATTGAAGTTGCTTAGGGTATGGAATTGTAGGAGGCTTCGTTCTTTACCGGAACTGCCACCATCCATTAACTGCCTAATTGCCATTAGTTGCAAGTCGTTGGAAATTGTGTCAACTTGTAAACCATCAAGTGGTGACCCAATAGACTTC 2394 0.3972 MALVAASSSSSAQSLPKKNDVFISFRGEDTRSNFTSHLYHAFCGKQIRTYIDYQLVKGDEISPSLVQAIEDSYVSVAVFSENYAASRWCLDELTHILHCKRVQGQIVIPVFYKVDPSHVRKQTGLYEQAFERYERDLKVDQHKMQMWKQALNETANLAGYDSHTFRDESELIQKIVKDILQKLNHKYPQEGSKNGLTELRRKFLSRLLRDDSLIDTSTSFLESRLSHMKVFVVLDDISTEAQLEELIGEPFCFGPGSKILITTRDKHVLSKGVDVIYKVKELKFHQSLELFSLNAFSTSLPIMGYEELTDRAVVYAQGIPLALKVLGSYLRGRSEVEWKSALSKLKKSPHPGIQKVLRLSYDGLDDEEKKIFLDIVCFFKGEPTEFVISLLDSFGFSGAIGIRILHDKALIEVYDGSCVEMHDLIQEMGLQIVREESNEPGRRSRLCNLEEIYDVLANNMGSKKVEGIMLDVSQIKDVHLEADIFKKMPNMRFLQFYSGSSSGHVHLPEGLKFLPNKMRYLEWHGFPLKSLRSTFCPEKLVELYLPHSHLQKLWNGVQDFVSLEVIDLSRSKQLQKLPNLSKCLNLKVVKLENCKSLCSVHSSILSLHSLVELNLYKCKKLERLKSELHLRSLQDINVMGCWNLKEFSVSSDELRELDLESTGIEILHSSEARSSKLEELNLRGSRLVNLPDQLSCLTSLTVLNLEHCEIIDDLKLHIFFDGMLSLKAVYLLECGNIIELPNNTKHLLGLKLLRVWNCRRLRSLPELPPSINCLIAISCKSLEIVSTCKPSSGDPIDF 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4135g00003 798 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 185 - -
Pral4135g00003 798 Pfam Leucine Rich Repeat 539 558 IPR011713 -
Pral4135g00003 798 Gene3D - 282 365 IPR042197 -
Pral4135g00003 798 Gene3D Ribonuclease Inhibitor 628 785 IPR032675 -
Pral4135g00003 798 SUPERFAMILY L domain-like 421 771 - -
Pral4135g00003 798 FunFam Disease resistance protein RPS4 462 652 - -
Pral4135g00003 798 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Pral4135g00003 798 Pfam NB-ARC domain 172 361 IPR002182 GO:0043531
Pral4135g00003 798 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 375 IPR027417 -
Pral4135g00003 798 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Pral4135g00003 798 SMART till_3 18 157 IPR000157 GO:0007165
Pral4135g00003 798 Gene3D Ribonuclease Inhibitor 445 627 IPR032675 -
Pral4135g00003 798 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 193 648 IPR044974 GO:0006952
Pral4135g00003 798 Pfam TIR domain 20 197 IPR000157 GO:0007165
Pral4135g00003 798 Gene3D - 14 189 IPR035897 -
Pral4135g00003 798 PRINTS Disease resistance protein signature 558 574 - -
Pral4135g00003 798 PRINTS Disease resistance protein signature 224 238 - -
Pral4135g00003 798 PRINTS Disease resistance protein signature 316 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4135g00003 Pral-Chr4135 22192 25293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4135g00003 17 760 WRKY Transcription Factor Family AT4G12020 32.044 1.06e-91 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4135g00003 - - pcin:129306877 891.723