Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4134g00006 ATGGCTCACCAGGACATGGCCCCTGATGCTGCTTCATCCTCTGCCTCTGCTAAATTTTCCCTCAAGAAATATGATGTTTTTATCAGCTTTAGGGGTGAAGACACTCGTGCCAACTTCACGAGCCATCTTTATGAAGCTTTCTGCAGGAAGAAAATAAGAACATACATAGACTCCAAACTTCCCAAAGGAGATGAGATCTCAGCTGCACTTACGCAAGCAATCAAGGATTCCTACGCCTCTGTTGTGGTATTCTCAGAAAATTATGCTTCTTCTAGATGGTGCTTGGATGAACTCACCCACATACTTCATTGCAAAAGGGTTCAAGAACAGATTGTTATTCCAGTATTTTATAAAGTTGAGCCCTCTCATGTGAGAAATCAGACTGGCCTTTACAAGCAAGCATTTGAGACCTATGAGAGAGACGTCAAGGTCAACCAACACAAGGTGCAAATGTGGAAGCATGCGCTCAATGAAGCTGCAAACTTAGCTGGTTATGACTCACACACATTCAGGGATGAATCTGAACTGATTCAAAAGACTGTCAAAGACATATTGCAGAAGTTGAGTCACAAATATCCACCTGCTGATTTGAAAGCACTTGTCGGTATTGATGAAAAGTGCAGGGAGATTGAATTATTGTTAAGAGATTTTGAAACCATTGGAATTTGGGGCATGGGGGGTATTGGCAAATCAACCGTTGCCAAAACTATATTTGTCAAATACTCTTCCCATTATGAAGGCTCTTGCTTCTTGGAAAATGTAAGAGAAAAGTCCGAAAATGGACTTGCTGAATTACGTTATAAGTTTATCTCCTGTTTATTAAAGGAAGAAGATACTTGTACTGATCCTTTAACAACTTTTGTTCTATCTAGACTTAGTCGTATGAAAGTTTTTGTTGTTCTTGACGATATCAGTACTGTGGAGCAATTAGAATATTTGGTGGGAGAACCATTTTGCTTTGGGCTAGGAAGTAAAATTCTCATCACAACTAGGGACAAGCATGTGCTTAGCAAAGGAGTTGATGAAATATATAAGGTTAAGGAATTGGACTTCCACCAATCCCTTAAACTTTTCAGCTTGAATGCCCTCAACAAAAAGGGCAGTTGCTTATGCAAAAGGAATTCCATTGGCTTTAAAAGTTTTGGGTTCATATCTCCGTGGCAAAAGTGA 1170 0.3974 MAHQDMAPDAASSSASAKFSLKKYDVFISFRGEDTRANFTSHLYEAFCRKKIRTYIDSKLPKGDEISAALTQAIKDSYASVVVFSENYASSRWCLDELTHILHCKRVQEQIVIPVFYKVEPSHVRNQTGLYKQAFETYERDVKVNQHKVQMWKHALNEAANLAGYDSHTFRDESELIQKTVKDILQKLSHKYPPADLKALVGIDEKCREIELLLRDFETIGIWGMGGIGKSTVAKTIFVKYSSHYEGSCFLENVREKSENGLAELRYKFISCLLKEEDTCTDPLTTFVLSRLSRMKVFVVLDDISTVEQLEYLVGEPFCFGLGSKILITTRDKHVLSKGVDEIYKVKELDFHQSLKLFSLNALNKKGSCLCKRNSIGFKSFGFISPWQK 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4134g00006 389 SMART till_3 23 162 IPR000157 GO:0007165
Pral4134g00006 389 Gene3D - 186 343 IPR027417 -
Pral4134g00006 389 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 190 - -
Pral4134g00006 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 365 IPR027417 -
Pral4134g00006 389 Gene3D - 21 185 IPR035897 -
Pral4134g00006 389 Pfam NB-ARC domain 215 366 IPR002182 GO:0043531
Pral4134g00006 389 PRINTS Disease resistance protein signature 219 234 - -
Pral4134g00006 389 PRINTS Disease resistance protein signature 291 305 - -
Pral4134g00006 389 Pfam TIR domain 23 202 IPR000157 GO:0007165
Pral4134g00006 389 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Pral4134g00006 389 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 165 IPR035897 -
Pral4134g00006 389 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 365 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4134g00006 Pral-Chr4134 39611 42188 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4134g00006 20 369 WRKY Transcription Factor Family AT4G12020 31.579 5.57e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4134g00006 - - pcin:129306877 559.296