Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4131g00010 ATGAAACGGGAAGTGCAGCTAGAGCCGCCAGTTGCGCAAAACCTTGGGGATTCCGACCCTCTGCTCGATAATCAGGAGGAGGAGGAGGAAGTGCGGAAGGAGGAGGAGTGCCCAGGAAGCACAAGTGAGATTAAGAGTGAAGATGTCGAGGCCGGTTCACTTCCTTCTTGTCGAATTTGCCTGGAAAGCGATTCCGACCCAGGTGATGAATTGATATCACCATGCATGTGCAAGGGGACCCAACAGTTTGTCCATCGTTCCTGTCTTGATCACTGGCGCTCAGTAAAGGAAGGGTTTGCCTTCTCACACTGCACCACTTGCAAAGCCCAGTTTCATCTTCGAGTTGAATTGTTTGAGGACAACTCCTGGCGTAAAATGAAGTTCAGGCTTTTTGTGGCGAGGGATGTTTTTCTTGTATTTTTGGCTGTACAAACTGTGATTGCGGCAATGGGTGCCTTTGCATACCTCATGGACAAAGATGGAGCATTCAGGAACTCATTCGATGATGGTTGGGATCGGATACTGTCAAACCATCCTATTCCATTTTATTACACTATTGGAGTAGTAGCATTCTTTGTGCTGCTTGGATTTTTTGGTCTCATTCTACATTGTTCCTCCCTCAATGCCAATGACTCTAGAATGGCTGGGTGTCAGAACTGTTGTTATGGATGGGGGATTTTGGATTGCTTTCCTGCATCAATGGAGGCATGCTTTGCCCTTGTGGTTGTTTTTGTAGTCATCTTCGCAATTTTGGGTATAGCTTACAGTTTCCTCGCAGCCACAATGGCGATTCAAAGAATTTGGCAGAGGCACTACCACATACTGACCAAGCGGGAGCTAACAAAGGAATATGTTGTGGAGGATCTCCAAGGTTCTTATTCCCCACCAAAATTGGACCCAGAACACGAAGAGCGCTTGAAAATGCTCAAGCTTTTGTGA 939 0.4675 MKREVQLEPPVAQNLGDSDPLLDNQEEEEEVRKEEECPGSTSEIKSEDVEAGSLPSCRICLESDSDPGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVELFEDNSWRKMKFRLFVARDVFLVFLAVQTVIAAMGAFAYLMDKDGAFRNSFDDGWDRILSNHPIPFYYTIGVVAFFVLLGFFGLILHCSSLNANDSRMAGCQNCCYGWGILDCFPASMEACFALVVVFVVIFAILGIAYSFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLQGSYSPPKLDPEHEERLKMLKLL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4131g00010 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 39 121 IPR013083 -
Pral4131g00010 312 SMART ringv_2 56 108 IPR011016 GO:0008270
Pral4131g00010 312 MobiDBLite consensus disorder prediction 1 47 - -
Pral4131g00010 312 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 15 312 - -
Pral4131g00010 312 SUPERFAMILY RING/U-box 55 112 - -
Pral4131g00010 312 Pfam RING-variant domain 57 107 IPR011016 GO:0008270
Pral4131g00010 312 CDD RING_CH-C4HC3_MARCH 57 108 - -
Pral4131g00010 312 ProSiteProfiles Zinc finger RING-CH-type profile. 49 114 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4131g00010 Pral-Chr4131 408825 411950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4131g00010 1 312 C3H Transcription Factor Family AT1G11020 77.812 1.57e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4131g00010 - - zju:107432369 546.969