Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4127g00006 ATGGCTGCCAAGAAGTGCTCTCTGCTGAAGGAAGTCAATGACTCAACTGACAGATGGAGAATTACAGTTCGTGTGATCAGGAGGTGGAATGTCTACAAGAAGGAGTCTCCTACTGAGGGGACAAGAATCCAAGCTTCTATCATGAACAAAAACCTATTTGATCGTTTTAGTGCCATGGCAGTGGAAGGGATAACTTATTTTATGGCTAATTTCGTCGTCTCTCCAAATAATAAGGAGTACAGGGCAACAAACCATGCTTTCAAACTGACACTAGGTACTTACACATATGTGAAGGAAGTACTTGCCCAAATACCTGAATACTCTTATCATTTCTTCCCTATTCGTGACATAATTAAGATGAAGGAGAGCAACCATGTTGACTATCTTATTGATGTCATTGGATTCGTTGCATCAATTGGGCATCTAGAGGAGTACAAGTCTAACAATGAGATCAAGAACAAATTGCGATTGTTGCTGGTAGATGAGCTTGGCAATACTGTGGGTTGCGTTCTTTATGATGACTGTGCAACCAATGTCTGCATGATGGATATTAGCACCATGCAATCTCCTGTTGTGATGATTATGCAGCTTGGAAGGATTGGATTTGATGATGATGGTATGGCTGAGATTTGCAGCTCATACCATGCCACCCAGATTTCATGCAATCCAAAGTTTCCAGAAGTCAAGCATTTTATCGATAGTGCTACCACATTACCCTCTCCTACTATCAGCACAATCTCTCATACTGCTACTACACAATCAAATGATCAGTCTGCAACTAGCCTGCTCCGTAACCATCCTTTGATTTTTGTTGCAGACATATGCAATCAGCCAGCTGATTCGTTCTTCCTCATAAAGTGCTTAGTAGTCAAAGTTGACACGAGGCATGGCTGGTGCTATGAAGGTTGCTCCAGGTTAAGGGTCCACTACACGGTTGAGGATTCATCTGGCAAGGCAACTGTAGTCTTCTTTGACAAACTTGCTTCTAATTTCTTCCAAAAGACTGCACTTGAGATGAATCACACTCTTATTAAGGAGGAACGTGAATATGATTTTCCTGATGAGCTAGACCTAATGGTTGGAAAGACGGTGCTGTTGAAACTTAAGCTGAACAAGTATAACGTTGACTTCCCAAATTCTGGCATATCTGTTGCATCATTCACACAGTGCACTGATTTGATGGATGAATTCAATGAGGTTAGCGATCAGAACACCCATGCTGAAGAAGAGGCCACTGACACAGTCGTTCCTGAATCTGTCACTGCTGACCCACTAGTATTGAATGAAGTTACTAATGTTGCCATCGACGAGAATGATGAAGACAGCCCCGGCATTGAGGAGATACCTCTGTCTAGGATAGCTGGCCCCTCAACTTACAGGCCAAAGAGGAAGGTAGCTGGGAAGAGGATCATTGGAGTTAAGGAGAAATGGGTTCGTTCACCCAATGCCTCACCTATCAAGACATCGTCCAAGCCTTTAAAGAGCATCAAGCAAGAGAAGAACTGA 1506 0.4283 MAAKKCSLLKEVNDSTDRWRITVRVIRRWNVYKKESPTEGTRIQASIMNKNLFDRFSAMAVEGITYFMANFVVSPNNKEYRATNHAFKLTLGTYTYVKEVLAQIPEYSYHFFPIRDIIKMKESNHVDYLIDVIGFVASIGHLEEYKSNNEIKNKLRLLLVDELGNTVGCVLYDDCATNVCMMDISTMQSPVVMIMQLGRIGFDDDGMAEICSSYHATQISCNPKFPEVKHFIDSATTLPSPTISTISHTATTQSNDQSATSLLRNHPLIFVADICNQPADSFFLIKCLVVKVDTRHGWCYEGCSRLRVHYTVEDSSGKATVVFFDKLASNFFQKTALEMNHTLIKEEREYDFPDELDLMVGKTVLLKLKLNKYNVDFPNSGISVASFTQCTDLMDEFNEVSDQNTHAEEEATDTVVPESVTADPLVLNEVTNVAIDENDEDSPGIEEIPLSRIAGPSTYRPKRKVAGKRIIGVKEKWVRSPNASPIKTSSKPLKSIKQEKN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4127g00006 501 CDD RPA1_DBD_A_like 20 89 - -
Pral4127g00006 501 SUPERFAMILY Nucleic acid-binding proteins 9 100 IPR012340 -
Pral4127g00006 501 Gene3D - 102 239 IPR012340 -
Pral4127g00006 501 Pfam Domain of unknown function DUF223 39 119 IPR003871 -
Pral4127g00006 501 SUPERFAMILY Nucleic acid-binding proteins 269 374 IPR012340 -
Pral4127g00006 501 MobiDBLite consensus disorder prediction 481 501 - -
Pral4127g00006 501 Gene3D - 4 99 IPR012340 -
Pral4127g00006 501 Gene3D - 304 399 IPR012340 -
Pral4127g00006 501 Coils Coil 390 410 - -
Pral4127g00006 501 SUPERFAMILY Nucleic acid-binding proteins 109 234 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4127g00006 Pral-Chr4127 67686 70227 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4127g00006 9 349 Core DNA Replication Machinery Family AT5G61000 26.933 2.36e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4127g00006 - - pcin:129290097 363.614