Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4127g00002 ATGGAGCACAAGCACGTTTTGCTGTCAGCATTGGGTGTTGGGGTTGGTCTCGGAGCAAGCCTTGGGTTGAGCTCAGGGCTTGGAGGGAATCACGAGTCTGGTGATGAGCTTTATGGTGAACAGATTGAGCAGGAGCTTTTGAGGCAGGTGATCGATGGAAAGGAATGCAAAGAAACTTTTCAAGAGTTTCCGTATTACTTAAGTGAAAGAACTCGAGAGTTATTGAAAAGTGCTGCATCTGTTCATTTAAGGCAACTTTTCTTTTCCAAGCACACTTGGAACCTTTCACCAGCAAGCAGGGCAATTCTGCTTTCTGGACCCGCGGAATTTTACGTACAAACGCTTGCCAGGGCTTTAGCACATCATTTTGAATCAAAGTTGCTGCTCCTAGATGTAGCTGATTTCTCTTCCAAGATACAAAGCAAATATGGATGTGTAAGAAAAGAATCAGTGGCTTCCCAGGGAGTGTCGGATTTGCTTGGTTCTGTCCTCTCTTCAAATGGCAAAACTAAAGGCACTTTTCAGAAACACAGTAATGCTACTGGAAGTCCCAATATCACTTCAAATATTCGTGCGACTACTGCTTCCCAATCTGCTCCGGCAAATTCTGCTAAGCAGAAAAGTAGCTTGTGTATCAATGAAAAACTCTTTATGCGGTTGCTTTACAAGGTATTGGTTTCTGTGTCAGAAAAGAGTTCCATCATCTTGTACATTAGGGATGTTGACAAGATTTTCCTCCAATCAGAGCAACTGTATAAGTTGTTTAATGATATGCTGGGGGAAATTCGAGGGCCAGTGCTGATACTCGGTTCCAAGATCGCTGTCCAAACCAAAAAACCTGGAAATCTCCCACCATACATAGTGTTGTCTCGCAAAGAGAATAAATGTTCAAAAGTTGATGAAAGGCTCGTAGCATTGTTCCCTTACATCATTAAGATCAAGCCACCAGAAGATGAAAATGATCTTAAGGAATGGAAAGCCCAGCTGGAAGAGAACAAGAAAACAATTGAGTCTCAAGATAACAGAAACCACATTGCTGATGTACTGGCAGAAAATGATGTTGAATGTAGAGACTTGAATTCAATTAGCCATGAGGACACAAAGATACTAAGTAAACATATCGAAGAAATTGTGTTATCCGCAATATCTTACTACTTGATGAATATCAAGGATCCAGAATATCGGAATCAAAAGCTTGTAATATCATCTGAAAGCTTGTGCCATGGTTTGGATCTATTTCGCAAAAAGGAAAGCAGGGACGAGGGAAAGAAGCAACAAACTAGGGGAAAAAAGGAAGTTCGTCCAGACAATCAGCATGAGGGGCATATAAGAGAAGAACTTATCCCTGCGAATGAGATAGGAGTTACATTCTCAGATATTGGTGCTTTAGAGGAAATTAAGGAATCACTACAAGAGCTAGTCATGCTTCCACTTCGAAGACCAGAGCTCTTCAAAAGTGGGCTTCTTAAGCCTTGTCGAGGCATATTGCTCTTTGGACCTCCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCCAATGAAGCAGGAGCTAGTTTCATCAATGTCTCCATGTCTACCATCACATCAAAGTGCTTTGGAGAATCTGAGAAGCATGTCCGTGCTCTGTTCTCTCTCGCTGCAAAGGTTTCTCCAACTATCATTTTCATTGATGAGGTTGATAGCTTGCTCGGGAGTCGAGCAAGACGTGGAGAGCATGAGGTTACGAGGAGGATTAAGAATGAATTCATGACCCATTGGGATGGTCTATTGACAAAACAAGATGAGAGAATTCTGGTTCTTGCTGCAACCAATAGGCCATTCGACCTTGATGATGCAATCATAAGGCGATTTGAGCGAAGAATCATGGTTGGTCTTCCATCAGTGGAGGCTAGGGAGATTATCTTGAAAACCCTTCTAAGTAAGGAAAATACTGAAAATTTAGACTTGAAGGAGATTGCAGTCATGACAGAGGGGTATACTGGAAGCGACCTCAAGAATTTGTGCACTGCTGCTGCTTATCGACCTGTTAGGGAGCTAATAAAACAGGAGAAGTTGGAGGCTTTGGAGAAGAATAAAGAAGAGGCTGAAGGCCAAAACTCAAAAGCTGCTTCAAGTGCCAAAGAGGATACAAAAGAGAAGGACAAGAGTGAGAAAGATGCTGAAGGTCAAAGCTCAGAAGCTGCTTCTAGTGCTAAGGAGGACAAAGAAGAGCCCGTGATTACCTTGAGGCCTATAAATATGGAAGACATGATTCAGGCTAAGAATCAGGTTCCTGCGAGTTTTGATGCTTGCGGATTAATTATGCATCAGTTGAAGCAGTGGAATGAGCTGTATGGAGAACGAGGTTCGCGGTAG 2358 0.4254 MEHKHVLLSALGVGVGLGASLGLSSGLGGNHESGDELYGEQIEQELLRQVIDGKECKETFQEFPYYLSERTRELLKSAASVHLRQLFFSKHTWNLSPASRAILLSGPAEFYVQTLARALAHHFESKLLLLDVADFSSKIQSKYGCVRKESVASQGVSDLLGSVLSSNGKTKGTFQKHSNATGSPNITSNIRATTASQSAPANSAKQKSSLCINEKLFMRLLYKVLVSVSEKSSIILYIRDVDKIFLQSEQLYKLFNDMLGEIRGPVLILGSKIAVQTKKPGNLPPYIVLSRKENKCSKVDERLVALFPYIIKIKPPEDENDLKEWKAQLEENKKTIESQDNRNHIADVLAENDVECRDLNSISHEDTKILSKHIEEIVLSAISYYLMNIKDPEYRNQKLVISSESLCHGLDLFRKKESRDEGKKQQTRGKKEVRPDNQHEGHIREELIPANEIGVTFSDIGALEEIKESLQELVMLPLRRPELFKSGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKCFGESEKHVRALFSLAAKVSPTIIFIDEVDSLLGSRARRGEHEVTRRIKNEFMTHWDGLLTKQDERILVLAATNRPFDLDDAIIRRFERRIMVGLPSVEAREIILKTLLSKENTENLDLKEIAVMTEGYTGSDLKNLCTAAAYRPVRELIKQEKLEALEKNKEEAEGQNSKAASSAKEDTKEKDKSEKDAEGQSSEAASSAKEDKEEPVITLRPINMEDMIQAKNQVPASFDACGLIMHQLKQWNELYGERGSR 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4127g00002 785 Gene3D - 628 759 - -
Pral4127g00002 785 Coils Coil 322 342 - -
Pral4127g00002 785 SMART AAA_5 491 628 IPR003593 GO:0016887
Pral4127g00002 785 Pfam AAA+ lid domain 647 683 IPR041569 -
Pral4127g00002 785 Coils Coil 679 706 - -
Pral4127g00002 785 Gene3D - 455 627 IPR027417 -
Pral4127g00002 785 MobiDBLite consensus disorder prediction 417 441 - -
Pral4127g00002 785 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 41 785 - -
Pral4127g00002 785 Pfam ATPase family associated with various cellular activities (AAA) 495 625 IPR003959 GO:0005524|GO:0016887
Pral4127g00002 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 451 676 IPR027417 -
Pral4127g00002 785 ProSitePatterns AAA-protein family signature. 598 617 IPR003960 GO:0005524|GO:0016887
Pral4127g00002 785 MobiDBLite consensus disorder prediction 691 744 - -
Pral4127g00002 785 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 454 629 - -
Pral4127g00002 785 MobiDBLite consensus disorder prediction 706 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4127g00002 Pral-Chr4127 1150 7194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4127g00002 455 686 Calmodulin-binding Proteins AT3G56690 40.254 2.08e-42 164