Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4127g00001 ATGGAGCACAAGCACGTTTTGCTGTCAGCATTGGGTGTTGGGGTTGGTCTCGGAGCAAGCCTTGGGTTGAGCTCAGGGCTTGGAGGGAATCACGAGTCTGGTGATGAGCTTTATGGTGAACAGATTGAGCAGGAGCTTTTGAGGCAGGTGATCGATGGAAAGGAATGCAAAGAAACTTTTCAAGAGTTTCCGTATTACTTAAGTGAAAGAACTCGAGAGTTATTGAAAAGTGCTGCATCTGTTCATTTAAGGCAACTTTTCTTTTCCAAGCACACTTGGAACCTTTCACCAGCAAGCAGGGCAATTCTGCTTTCTGGACCCGCGGAATTTTACGTACAAACGCTTGCCAGGGCTTTAGCACATCATTTTGAATCAAAGTTGCTGCTCCTAGATGTAGCTGATTTCTCTTCCAAGATACAAAGCAAATATGGATGTGTAAGAAAAGAATCAGGAGTGTCGGATTTGCTTGGTTCTGTCCTCTCTTCAAATGGCAAAACTAAAGGCACTTTTCAGAAACACAGTAATGCTACTGGAAGTCCCAATATCACTTCAAATATTCGTGCGACTACTGCTTCCCAATCTGCTCCGGCAAATTCTGCTAAGCAGAAAAGTAGCTTGTGTATCAATGAAAAACTCTTTATGCGGTTGCTTTACAAGGTATTGGTTTCTGTGTCAGAAAAGAGTTCCATCATCTTGTACATTAGGGATGTTGACAAGATTTTCCTCCAATCAGAGCAACTGTATAAGTTGTTTAATGATATGCTGGGGGAAATTCGAGGGCCAGTGCTGATACTCGGTTCCAAGATCGCTGTCCAAACCAAAAAACCTGGAAATCTCCCACCATACATAGTGTTGTCTCGCAAAGAGAATAAATGTTCAAAAGTTGATGAAAGGCTCGTAGCATTGTTCCCTTACATCATTAAGATCAAGCCACCAGAAGATGAAAATGATCTTAAGGAATGGAAAGCCCAGCTGGAAGAGAACAAGAAAACAATTGAGTCTCAAGATAACAGAAACCACATTGCTGATGTACTGGCAGAAAATGATGTTGAATGTAGAGACTTGAATTCAATTAGCCATGAGGACACAAAGATACTAAGTAAACATATCGAAGAAATTGTGTTATCCGCAATATCTTACTACTTGATGAATATCAAGGATCCAGAATATCGGAATCAAAAGCTTGTAATATCATCTGAAAGCTTGTGCCATGGTTTGGATCTATTTCGCAAAAAGGAAAGCAGGGACGAGGGAAAGAAGCAACAAACTAGGGGAAAAAAGGAAGTTCGTCCAGACAATCAGCATGAGGGGCATATAAGAGAAGAACTTATCCCTGCGAATGAGATAGGAGTTACATTCTCAGATATTGGTGCTTTAGAGGAAATTAAGGAATCACTACAAGAGCTAGTCATGCTTCCACTTCGAAGACCAGAGCTCTTCAAAAGTGGGCTTCTTAAGCCTTGTCGAGGCATATTGCTCTTTGGACCTCCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCCAATGAAGCAGGAGCTAGTTTCATCAATGTCTCCATGTCTACCATCACATCAAAGTGCTTTGGAGAATCTGAGAAGCATGTCCGTGCTCTGTTCTCTCTCGCTGCAAAGGTTTCTCCAACTATCATTTTCATTGATGAGGTTGATAGCTTGCTCGGGAGTCGAGCAAGACGTGGAGAGCATGAGGTTACGAGGAGGATTAAGAATGAATTCATGACCCATTGGGATGGTCTATTGACAAAACAAGATGAGAGAATTCTGGTTCTTGCTGCAACCAATAGGCCATTCGACCTTGATGATGCAATCATAAGGCGATTTGAGCGAAGAATCATGGTTGGTCTTCCATCAGTGGAGGCTAGGGAGATTATCTTGAAAACCCTTCTAAGTAAGGAAAATACTGAAAATTTAGACTTGAAGGAGATTGCAGTCATGACAGAGGGGTATACTGGAAGCGACCTCAAGAATTTGTGCACTGCTGCTGCTTATCGACCTGTTAGGGAGCTAATAAAACAGGAGAAGTTGGAGGCTTTGGAGAAGAATAAAGAAGAGGCTGAAGGCCAAAACTCAAAAGCTGCTTCAAGTGCCAAAGAGGATACAAAAGAGAAGGACAAGAGTGAGAAAGATGCTGAAGGTCAAAGCTCAGAAGCTGCTTCTAGTGCTAAGGAGGACAAAGAAGAGCCCGTGATTACCTTGAGGCCTATAAATATGGAAGACATGATTCAGGCTAAGAATCAGGTTCCTGCGAGTTTTGATGCTTGCGGATTAATTATGCATCAGTTGAAGCAGTGGAATGAGCTGTATGGAGAACGAGGTTCGCGGTAG 2346 0.4241 MEHKHVLLSALGVGVGLGASLGLSSGLGGNHESGDELYGEQIEQELLRQVIDGKECKETFQEFPYYLSERTRELLKSAASVHLRQLFFSKHTWNLSPASRAILLSGPAEFYVQTLARALAHHFESKLLLLDVADFSSKIQSKYGCVRKESGVSDLLGSVLSSNGKTKGTFQKHSNATGSPNITSNIRATTASQSAPANSAKQKSSLCINEKLFMRLLYKVLVSVSEKSSIILYIRDVDKIFLQSEQLYKLFNDMLGEIRGPVLILGSKIAVQTKKPGNLPPYIVLSRKENKCSKVDERLVALFPYIIKIKPPEDENDLKEWKAQLEENKKTIESQDNRNHIADVLAENDVECRDLNSISHEDTKILSKHIEEIVLSAISYYLMNIKDPEYRNQKLVISSESLCHGLDLFRKKESRDEGKKQQTRGKKEVRPDNQHEGHIREELIPANEIGVTFSDIGALEEIKESLQELVMLPLRRPELFKSGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKCFGESEKHVRALFSLAAKVSPTIIFIDEVDSLLGSRARRGEHEVTRRIKNEFMTHWDGLLTKQDERILVLAATNRPFDLDDAIIRRFERRIMVGLPSVEAREIILKTLLSKENTENLDLKEIAVMTEGYTGSDLKNLCTAAAYRPVRELIKQEKLEALEKNKEEAEGQNSKAASSAKEDTKEKDKSEKDAEGQSSEAASSAKEDKEEPVITLRPINMEDMIQAKNQVPASFDACGLIMHQLKQWNELYGERGSR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4127g00001 781 Coils Coil 318 338 - -
Pral4127g00001 781 Coils Coil 675 702 - -
Pral4127g00001 781 Pfam ATPase family associated with various cellular activities (AAA) 491 621 IPR003959 GO:0005524|GO:0016887
Pral4127g00001 781 MobiDBLite consensus disorder prediction 413 437 - -
Pral4127g00001 781 ProSitePatterns AAA-protein family signature. 594 613 IPR003960 GO:0005524|GO:0016887
Pral4127g00001 781 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 450 625 - -
Pral4127g00001 781 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 41 781 - -
Pral4127g00001 781 MobiDBLite consensus disorder prediction 687 740 - -
Pral4127g00001 781 SMART AAA_5 487 624 IPR003593 GO:0016887
Pral4127g00001 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 447 672 IPR027417 -
Pral4127g00001 781 Gene3D - 451 623 IPR027417 -
Pral4127g00001 781 Pfam AAA+ lid domain 643 679 IPR041569 -
Pral4127g00001 781 Gene3D - 624 755 - -
Pral4127g00001 781 MobiDBLite consensus disorder prediction 702 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4127g00001 Pral-Chr4127 1150 7194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4127g00001 451 682 Calmodulin-binding Proteins AT3G56690 40.254 2.07e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4127g00001 - - pcin:129285842 1167.53