Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4126g00003 ATGGAACACAAGCACGTTTTGCTGTCGGCATTGGGTGTTGGAGTTGGTCTCGGAGCAGGCCTTGGGTTGAGCTCAGGCCTTGTTGGAGGGAATCGCGAGTCAGCTGATAAGCTTTATGGCGAACAGATCGAGCAGGAACTTTTGAGGCTGGTGATTGATGGAAAAGAATGCAAGGAAACTTTCCAAGACTTTCCTTATTACTTAAGTGAAAGAACCCGAGAGCTATTGAAAAGTGCTGCGTCTGTTCATTTAAAACAACCTTCCTTCTCCAAACATACCAGGAACCTTTCACCAGCAAGCAGGGCAATTCTGCTTCATGGGCCTGCAGAGTTTTACCTGCAAACGCTTGCCAGGGCTTTAGCACATCACTTTGAATCAAAGTTGCTGCTGCTAGATTTGGCTGACTTTTCTTCCAAGATCCAGAAAAAATATGGATTTGCAAGACAAGAACCATCTTCTAAAATATCCTTATCTGAGGTGGCTTCCGAGAGATTGTCTGGTTTGCTTTGTTCCTTTTCGGCAGTCTTCCCTTCAAATGGCAAAAAAAAAGGTACTTTTCAAAATCACAGTAATGCTACTGGAAGTCCCATTATTGCTTCAAAGCTTCACGAGACTACTGCTTCCCAATCTGCGCCAGCAAATTCTGCTCCCTTGAAGCAGAAGAGCAGCTTGTGTGTCGATGAAAAACTCTTTATACAGTTGCTTTATAAGGTCTTGATTTCTGTGTCGGAAGAGAACCCCATCATTTTGTACATCAGGGAAGCTGACAAGATTTTTCTCCAATCAGAGCAACTTTATAATTTGTTTCATGAAATGCTAGGGGAACTTCCAGGGCCAGTGCTCATACTTGGTTCCAAGATCTCAGGCAAAGCCAAAAAACCTGATTTCCCACCATGGATGCTTGCGCCTCACAAAGGGTATAAATGTTCAAAAGTTGATGAACAGCTCGCAGCATTATTCCCTTACAGTATTAAGATCAAACCACCAGAAGATGAAGCTGATCTTGAAGATTGGAAAGCCCAACTGGAAGAGAACAAGAAAACAATTAAATCTCAAGATAACAGAAACCATATTGCCGAAGTTCTGGCAGCAAATGATGTTGAATGTAAAGACTTGAATTCAATCAGCCATGAGGACACAAAGATACTAAGTAGATATATTGAAGAAATTGCTGTATCTGCAATATCTCACTACTTCATGAATACCAAGGATCCAGAATACCAGAACGGGAAGCTTGTAATATCATCTGAGAGTTTGTGCCAAGCTTTGGATCTATTTCGCAAAAAGAAAAGTAATGATGATGGAAAGAAGCAAGGGACTAGTGGAAAGAAGCAAGGGCCTGATGGAAAGAAGGAAGTTTGTCCAGACAATGAGCATGAGAGGCACATAAGAGAGGAACTTATCCCTGCGAATGAGATAGGTGTGACATTCTCAGATATTGGTGCATTAGAGGAAATTAAGGAATCACTACAAGAGCTAGTCATGCTTCCACTTCGAAGACCAGAGCTCTTCAAAAGTGGGCTTCTTAAGCCTTGTCGAGGCATATTGCTTTTTGGACCTCCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCAGGAGCTAGTTTCATCAATGTCTCCATGTCTACCATCACATCAATGTGGTATGGAGAAGCTGAGAAGCATGTCCGTGCTCTGTTCTCTCTAGCTGCAAAGGTTTCTCCAACTATCATTTTCATTGATGAAGTTGATAGCTTGCTCGGGCGACGATCAAGATGTGGAGAGCATGAGGCTACGAGGAGCATTAAGAATGAATTCATGACCCATTGGGATGGTCTATTGACAAAACAACACGAGCGTATTCTAGTTCTTGGTGCAACCAATAGGCCATTTGACCTCGATGATGCAATCATAAGACGGTTTGAGCGAAGAGTCATGGTTGGTCTGCCATCTGTCGAGGCTAGGGAGATTATCTTGAAAACTCTGCTAGCTAAGGAAAATACTGAAAACTTAGACCTCAAAAAGATTGCAGTCATGACAGAGGGATATACTGGAAGCGACCTCAAGAATTTGTGCACTGCTGCTGCTTATCGACCTGTTAGGGAGCTCATAAAGCAGGAGAAATTGAAGGATATGGAAAAGAATAAGAAAGAGGCTGAAGGCCAAAGCTCCGAAGCTGCTTCAAGTCCCAAAGAGGATACAGAAGAACAAGACAAGAATAAGAAAGATGCTGAAGGCCAAAGCTCAGAAAGTGATAAGGAGGACAAAGAAGAGCCAGTAATTACCTTGAGGCCCATAAATATGGAAGACATGATTCAGGCTAAGAATCAGGTTCCTGCAAGTTTTGATGGTCACGGGGCAATTATGCATGAATTGAGGCAGTGGAATGAGCTGTATGGAGATCGAGGTTCTCTGTAG 2409 0.4276 MEHKHVLLSALGVGVGLGAGLGLSSGLVGGNRESADKLYGEQIEQELLRLVIDGKECKETFQDFPYYLSERTRELLKSAASVHLKQPSFSKHTRNLSPASRAILLHGPAEFYLQTLARALAHHFESKLLLLDLADFSSKIQKKYGFARQEPSSKISLSEVASERLSGLLCSFSAVFPSNGKKKGTFQNHSNATGSPIIASKLHETTASQSAPANSAPLKQKSSLCVDEKLFIQLLYKVLISVSEENPIILYIREADKIFLQSEQLYNLFHEMLGELPGPVLILGSKISGKAKKPDFPPWMLAPHKGYKCSKVDEQLAALFPYSIKIKPPEDEADLEDWKAQLEENKKTIKSQDNRNHIAEVLAANDVECKDLNSISHEDTKILSRYIEEIAVSAISHYFMNTKDPEYQNGKLVISSESLCQALDLFRKKKSNDDGKKQGTSGKKQGPDGKKEVCPDNEHERHIREELIPANEIGVTFSDIGALEEIKESLQELVMLPLRRPELFKSGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSMWYGEAEKHVRALFSLAAKVSPTIIFIDEVDSLLGRRSRCGEHEATRSIKNEFMTHWDGLLTKQHERILVLGATNRPFDLDDAIIRRFERRVMVGLPSVEAREIILKTLLAKENTENLDLKKIAVMTEGYTGSDLKNLCTAAAYRPVRELIKQEKLKDMEKNKKEAEGQSSEAASSPKEDTEEQDKNKKDAEGQSSESDKEDKEEPVITLRPINMEDMIQAKNQVPASFDGHGAIMHELRQWNELYGDRGSL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4126g00003 802 Gene3D - 33 350 IPR027417 -
Pral4126g00003 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 363 IPR027417 -
Pral4126g00003 802 Coils Coil 699 726 - -
Pral4126g00003 802 MobiDBLite consensus disorder prediction 705 758 - -
Pral4126g00003 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 694 IPR027417 -
Pral4126g00003 802 Coils Coil 335 355 - -
Pral4126g00003 802 SMART AAA_5 511 648 IPR003593 GO:0016887
Pral4126g00003 802 Pfam ATPase family associated with various cellular activities (AAA) 515 645 IPR003959 GO:0005524|GO:0016887
Pral4126g00003 802 ProSitePatterns AAA-protein family signature. 618 637 IPR003960 GO:0005524|GO:0016887
Pral4126g00003 802 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 42 801 - -
Pral4126g00003 802 Pfam AAA+ lid domain 667 710 IPR041569 -
Pral4126g00003 802 MobiDBLite consensus disorder prediction 430 457 - -
Pral4126g00003 802 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 474 649 - -
Pral4126g00003 802 Gene3D - 475 647 IPR027417 -
Pral4126g00003 802 Gene3D - 648 777 - -
Pral4126g00003 802 MobiDBLite consensus disorder prediction 726 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4126g00003 Pral-Chr4126 35687 42111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4126g00003 475 706 Calmodulin-binding Proteins AT3G56690 38.235 4.51e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4126g00003 - - pcin:129285842 1214.91