Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4126g00001 ATGGAGCAGAAGAATGTTTTGCTGTCAGCATTAGGTATTGGGTTTTGGTTTTGGAGCAGGGCTTGGATTCAGTTCAGGCTTGGAGGGAATTCTGATGAAGAAGAAGATCTCTGGAATGAGCACGTTAAGCAAGAACTTATGAGGCAGGTTATTGATGGGAAGGAATGCAAAGAAACTTTCCAAGACTTTCCTTATTACTTAAGTGAAAGTAGTCGGCAGTTATTGATGAGTGCTGCATTTGTTCATCTAAAACAACTTATCTTCTCTAGACACATCCGGAACCTTCCACAAACAAGCAGGGCAATCTTACTTTCTGGTCCAACAGAACTTTACCTGCAAACAATTGCCAAGGCTTTAGCACATCATTTTGAATCAAAGTTGCTGCTACTAGATATTGCTGACTTCTCTTTCAAGGTGAGGAGAAAATATGGATGTGCAAGAAAAGAATCATCTTCTAAAAGGTCCTTATCTGAGGTGGCTTCCAAGAGATTGGCCAGTCTGTTTCGTTCCTCTTCGACTAGTGAAGCTGAAGATCCCCCCAAGAACAAAAGTGACATGTGCATGGATGAAGAATTCTTCATGCAGTTGCTTTATAAGGTTTTGGTTTCTGTCTCAGAAAAAAGTTCCATCATATTATACATCAGGGATGTTGAGAGGATTTTCCTAGAATCAGAACATTTGTATAAGTTGTTTCAAGAAATTCAGAAACTTTCAGGGCCAATTTTGATACTTGGTTCCCAAATAACTGATGTTGAAGAATGGTCGACAGATGAATTGCTGGGAAATGGGTGCTTACCAGATGAATTGCTGGGAAATGAGTGGTTACCATGTTTTGTTCCACCACCAGAAGTTGGTGCAGAAGTTGATGAAAGGCTCGCTGCATTCGCTGCATTATTCCCTTACAATATTCAGATCAAACCTCCTAAAGATGAGCATAATCTTCAAAACTGGAAAACCCAACTAGAGGGTGACAAGAAAACAATTCAGTCTCAAGATAACCAAAACCACATTGCTAAAGTACTAGCAGAAATGGATGTTGAATGTAAAGACTTGAATTCAATCACCCACGAGGATACAGAAGTCCTAAGCAAACATATTGAAGACATTGTGGTATCTGCAGTATCTTACTACTTGATGAATACCAAGGACCCAGAATATCATAATGGAAAGCTTGTAATATCATCTGAAAGATCTTGGGAATTTACAGTTTGTGCCACAGTTTGGGTCTATTCGCAAAGCAATATTGTCAATGATACTCAGAAGACAGAGACTGTCAATCATACTCAGAAGACAGAGACTGATGGAAAGAAAGAAGTTCCTCCGGACAATAATTATGAAGCGAACATGAGATCAGAGCTTATCCCTGCAAATCAGATAGGAGTTACATTCGCAGATATTGGTGCATTAGAGGAAGTTAAGGAATCACTCCAAGAGCTAATCATGCTTCCACTTCGAAGACCAGAGCTCTTCAAAGGTGGACTTCTTAAGCCTTGTCGAGGTATTCTACTTTTCGGACCTCCAGGAACCGGCAAAACAATGCTTGCAAAGGCAATTGCACATGAGGCAGGAGCAAGTTTCATCAATGTCCCAATGTCTGCCATCACATCAATGTGGTATGGAGAAGCTGAGAAGAATGTCCGAGCTATCTTCACACTGGCTGCAAAGGTTTCTCCAACTATTATTTTTATTGATGAGGTTGATAGCTTGCTTGGGCAAAGAGCAAGATGCGGAGAGCATGAGGCAACGAGGAGGATTAAGAATGAATTCATGACCCATTGGGATGGCCTGTTGACAAAACAAGATGAGAGAATTCTAGTTCTTGCCGCAACCAACAGGCCATTTGACCTTGATGATGCAATCATAAGACGGTTTCAGCGAAGATTCATGGTTGGTCTTCCATCTGTTGAGACTAGGGAGATTATCTTGAAAACCATGCTAGCCAAGGAAAATACTGAAAAGTTAGACTTCAAAGAGCTTGCAATC 1983 0.4075 MEQKNVLLSALGIGFWFWSRAWIQFRLGGNSDEEEDLWNEHVKQELMRQVIDGKECKETFQDFPYYLSESSRQLLMSAAFVHLKQLIFSRHIRNLPQTSRAILLSGPTELYLQTIAKALAHHFESKLLLLDIADFSFKVRRKYGCARKESSSKRSLSEVASKRLASLFRSSSTSEAEDPPKNKSDMCMDEEFFMQLLYKVLVSVSEKSSIILYIRDVERIFLESEHLYKLFQEIQKLSGPILILGSQITDVEEWSTDELLGNGCLPDELLGNEWLPCFVPPPEVGAEVDERLAAFAALFPYNIQIKPPKDEHNLQNWKTQLEGDKKTIQSQDNQNHIAKVLAEMDVECKDLNSITHEDTEVLSKHIEDIVVSAVSYYLMNTKDPEYHNGKLVISSERSWEFTVCATVWVYSQSNIVNDTQKTETVNHTQKTETDGKKEVPPDNNYEANMRSELIPANQIGVTFADIGALEEVKESLQELIMLPLRRPELFKGGLLKPCRGILLFGPPGTGKTMLAKAIAHEAGASFINVPMSAITSMWYGEAEKNVRAIFTLAAKVSPTIIFIDEVDSLLGQRARCGEHEATRRIKNEFMTHWDGLLTKQDERILVLAATNRPFDLDDAIIRRFQRRFMVGLPSVETREIILKTMLAKENTEKLDFKELAI 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4126g00001 661 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 41 660 - -
Pral4126g00001 661 MobiDBLite consensus disorder prediction 421 442 - -
Pral4126g00001 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 455 658 IPR027417 -
Pral4126g00001 661 ProSitePatterns AAA-protein family signature. 604 623 IPR003960 GO:0005524|GO:0016887
Pral4126g00001 661 Gene3D - 461 632 IPR027417 -
Pral4126g00001 661 Gene3D - 633 659 - -
Pral4126g00001 661 Pfam ATPase family associated with various cellular activities (AAA) 501 631 IPR003959 GO:0005524|GO:0016887
Pral4126g00001 661 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 460 635 - -
Pral4126g00001 661 SMART AAA_5 497 634 IPR003593 GO:0016887
Pral4126g00001 661 MobiDBLite consensus disorder prediction 425 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4126g00001 Pral-Chr4126 4 4052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4126g00001 461 660 Calmodulin-binding Proteins AT3G56690 39.706 2.34e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4126g00001 - - pcin:129300821 841.262