Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4124g00002 ATGGCTTTGATGTGGGAGGAAGGTGGAAAAGAACACATGGATGACAAGTTTCTGAGGGACACTGCCTTTAATCTTTTCGCTGGAGGTAGAGATACGATAACTTCAGCCCTCACATGGTTCTTTTGGCTTACTGCTTCACATCCTTCAGTGGAAGCTAAGATACTTGAAGAGATCAAACAAGAAAAGGAAGCTAACAAACAGTTATATCTTCGTGCTTCTCTTTGTGAAGCTCTGAGATTGTATCCTCCCATATCTCTTGATCGAAAGCAAGCAATCAAATATAACGTACTTCCTAGTGGACATGAGGTTAGTCCAAATCCTATGATTCTGTTATCTTTGTACGCAATGGGGAAACATGAAGCCATATGGGGAAAACATTGCTTGGAATTCAAACCAGAGAGATGGATCTCAGAGAGAGGACACATCATTCACGTTCCATCAAACAAGTTTTTTAGTTTCAATGCAGGACCCAGGACTTGCTTGGGGAAGGACTTGTCCTTCATTCAAATGAAGATAATGGCTAGTTCTATTTTGTGGAATTATGACGTTCATGTAGTGGAAGATCATCCGATTTCTCCAACGTTTTCAATAGCTCTTCGAATGAAGCATGGTCTCAAAGTTCGGATCAGAAGAAGGGGCTGA 642 0.4128 MALMWEEGGKEHMDDKFLRDTAFNLFAGGRDTITSALTWFFWLTASHPSVEAKILEEIKQEKEANKQLYLRASLCEALRLYPPISLDRKQAIKYNVLPSGHEVSPNPMILLSLYAMGKHEAIWGKHCLEFKPERWISERGHIIHVPSNKFFSFNAGPRTCLGKDLSFIQMKIMASSILWNYDVHVVEDHPISPTFSIALRMKHGLKVRIRRRG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4124g00002 213 PRINTS E-class P450 group I signature 160 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4124g00002 213 PRINTS E-class P450 group I signature 150 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4124g00002 213 PRINTS E-class P450 group I signature 37 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4124g00002 213 PRINTS E-class P450 group I signature 17 34 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4124g00002 213 PRINTS P450 superfamily signature 28 45 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4124g00002 213 PRINTS P450 superfamily signature 151 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4124g00002 213 PRINTS P450 superfamily signature 160 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4124g00002 213 PRINTS P450 superfamily signature 72 83 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4124g00002 213 Pfam Cytochrome P450 7 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4124g00002 213 PANTHER CYTOCHROME P450 12 207 - -
Pral4124g00002 213 SUPERFAMILY Cytochrome P450 6 212 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4124g00002 213 Gene3D Cytochrome P450 1 213 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4124g00002 213 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 153 162 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4124g00002 Pral-Chr4124 17371 18012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4124g00002 14 213 Cytochrome P450 AT2G23180 50.704 7.35e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4124g00002 - - pcin:129305260 306.605