Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00117 ATGTCTGAAAGAGATTCCACTAAGCTGCTAGCATTATTCTTGTGTGTTACTGTCTTTGCATTTGTCTCCGCTACAGATAGCGAAGCAAAAGCTCTGTTGAACTGGAGAGCTAGCTTCAATGACCAAAGCAAAGCTATCTTGTCCTCTTGGAATAATGCCACTAATCCTTGCAGAGAGTTGTGGAGGGGAATTTCTTGTGATGAGTACATGTCTGTGATCAACATAAGTCTCTCAAATCTTGGCCTTCAAGGTAAACTTTCCACTCTCAACTTCGCTGCCTTTCCTAATCTCCTCTACTTCGACATACGTTACAACCAATTTTATGGATACGTTGCCCATGAAATTGGTTATTTGTCCAGGATTTCGATACTGGGTTTGTCAGATAATCCAATTTGGGGTCGTATTCCTCCTGAAATCTGGAATCTAACCACTCTAAGTCAACTTGATCTTAGTACATGTAATCTCACAGGACAAATTCCCCAAGAAATTGGGAATTTGAGGAATTTGAATCTCCTATGGCTTGGAGAAAATTTGCAGCTTTCTGGTCCCATCCCTGAAGAGATTGGAATGTTGAGTAATCTTGTAGACCTCCGTTTACAAAGCAACTATCTGTCAGGGAGAATCCCATCATCAATTGGAAATTTGACCAAGTTACAGACGCTTTCTCTTTATGAGAACAATCTCGCAGGTCCTATTCCTACTGAATTCTGGAAACTCTATTCCCTCGTTAACATTCAATTCCGTTATAATAGATTTTCAGGGCCAATCTCTCCCTCTATAGGAAATCTAACAAATCTCATGCAATTGTCCTTTTCTAATAACAGATTTTCTGGTCCGATTCCTCCATCCATTGGTAATTTGATCGATCTAGACAATTTCTTCCTTCGAAACAATAGTCTTTCAGGATCTGTTCCTTCCTCTATAGGAAATATGACGAAGGTCACTGGATTGCACTTGGACATCAACAATTTTAGTGGTCAACTTCCGCAAGAAATGAATAACTTAACAAGTTTGTATTATGTGCGACTGAGTGATAATCATTTTAGTGGTCCTTTGCCACAAAAAATTTGTGAAAGTGGGAGGTTATTTTGGTTTAATGCTAATGATAACCATTTCACTGGTCCTATTCCAACAAGTTTGAAGAATTGTTCTAGTCTAAAAAGACTCAGGCTTGAAAATAACCAAATAGTAGATAATATAACATATGCTTTTGGAGTATATCCTTATTTGCGCGTCGTTGATCTAAGTGGAAACCAATTGTATGGCCACCTTTCATCTAGGTGGGGGAAGTGTCAAAATCTCACTCATTTGACTATTCACAGCAACAAGCTTTCTGGTGATATACCACCAAAATTAGGAGAGGCAACTCGGCTTGAATTACTTGACTTGTCTTCAAATCATTTGTCTGGACAAATCCCAAAAGAACTAAGAAAGTTGGTCTTTCTGCGATTCCTCTTTCTGACCCATAACAACTTTTCTGGTGGTATCCCCTCAAATATAATAAGATCACTTAACCAGCTTGAAAAGTTGGACTTGGCAGAAAATAAAATTAGTGGCTCAATCACAAGAGAGTTTGGAGTATTAAAAAGGTTAAGGATATTGAATTTGAGCAAAAACAAATTTGATGAAAGCATTCCCATTGAGTTTGGCCAACTAGAGGGGCTTGAAGAACTTGATCTAAGTGATAATTTGTTGACTGGCACAATAGCAGCAACATTTGGAATGTTCCCCAACTTGCAAGTATTGAACCTTTCACATAACAGTCTTAATGGCACTATCCCTTCTAGCTTTAATGGACCAGTGTCAGCATTGTCTGTAGTTGACATATCATACAATCAATTGGAAGGCCCTGTTCCAAACAAACCAGCCTTTCGTAACTTTGATGCGTTGAGGAATAACAAAGGTTTGTGTGGTAATATCGCTGGCTTAAGTCCTTGTGGAGATTTCCAAACAAATGGGCACTATCAAAAGACCAAAAAGTTCTTGATAATACTCCTCCCTTTGGCCCTGCTGCTACTAGTACTTGCTGGAGCATCTGTCATTTTTTCTCTAATAGCAACAAAAGCTAAAAACAAAGATGGAGAAGCTCGACTAGAAGATGTTTATTTTGTATGGAGTCTTGAAAGGGAAATATTGTATGAAGATATCATTGAAGCCACAAACGAATTTGATGAAAGATATCTGGTCGGGAGAGGAGGCCAAGGAAGTGTTTATAGAGCTGAGTTGCCTACAGGTGACATTGTTGCAATAAAGAAGCTTCATTCAATGCCGAGTGGGGAAATCTCCAACCAGAAAGCTTTTACAAGAGAGATTCGAGCCTTGACGGAAATCAAACATCGTAACATTGTGAAGTTGTATGGGTTTTATTCTAGTCCACAACTCTCCATTTTGGTTTATGAGTTCTTGGAAGGTGGTAACTTGGATAGCATACTAAAGGATGAGAACCAAGCCACTGAGTTTGATTGGAAAAAGAGGGTGAATGTTGTCAAAGGTGTGGCTAATGCTTTATTCCATATGCACCACGGTTGTTCAATTCCTATCGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCTGACTATGAAGAAGCTCGCATCATTGATTTTGGAACGGCAAAGTTTTTGAATCCTAACTCAAAAAATATGACCACATTTGCTGGCACATTTGGGTATGCTGCGCCAGAGCTTGCTTTCATCATGGAAGCGAATGAAAAATGTGATGTATATAGCTTTGGAGTGTTGACTTTAGAAATCATCATGGGTACACATCCTGCAGAGCTTATTTCATACTTGGCGGAGAAACCGACTAATAATGGTTTGTTGTTTAAGAATCTGGTGGACCCGCGACTTTCTCCCTTGAGATTCAGAAAATCAATTCAAGATGAAGTTATCTTAATTGCAAAAATAGCATTTTCTTGCTTGATTGAGAATCCTCGGTCTCGTCCAACTATGGAACAAGTATCAATAGAGCTTGTAAGGAGACCAATATCTCATTTACAGGATCAGTTTCATAGCATCACAATTGCACAACTCATGAGGGATTGA 3051 0.3887 MSERDSTKLLALFLCVTVFAFVSATDSEAKALLNWRASFNDQSKAILSSWNNATNPCRELWRGISCDEYMSVINISLSNLGLQGKLSTLNFAAFPNLLYFDIRYNQFYGYVAHEIGYLSRISILGLSDNPIWGRIPPEIWNLTTLSQLDLSTCNLTGQIPQEIGNLRNLNLLWLGENLQLSGPIPEEIGMLSNLVDLRLQSNYLSGRIPSSIGNLTKLQTLSLYENNLAGPIPTEFWKLYSLVNIQFRYNRFSGPISPSIGNLTNLMQLSFSNNRFSGPIPPSIGNLIDLDNFFLRNNSLSGSVPSSIGNMTKVTGLHLDINNFSGQLPQEMNNLTSLYYVRLSDNHFSGPLPQKICESGRLFWFNANDNHFTGPIPTSLKNCSSLKRLRLENNQIVDNITYAFGVYPYLRVVDLSGNQLYGHLSSRWGKCQNLTHLTIHSNKLSGDIPPKLGEATRLELLDLSSNHLSGQIPKELRKLVFLRFLFLTHNNFSGGIPSNIIRSLNQLEKLDLAENKISGSITREFGVLKRLRILNLSKNKFDESIPIEFGQLEGLEELDLSDNLLTGTIAATFGMFPNLQVLNLSHNSLNGTIPSSFNGPVSALSVVDISYNQLEGPVPNKPAFRNFDALRNNKGLCGNIAGLSPCGDFQTNGHYQKTKKFLIILLPLALLLLVLAGASVIFSLIATKAKNKDGEARLEDVYFVWSLEREILYEDIIEATNEFDERYLVGRGGQGSVYRAELPTGDIVAIKKLHSMPSGEISNQKAFTREIRALTEIKHRNIVKLYGFYSSPQLSILVYEFLEGGNLDSILKDENQATEFDWKKRVNVVKGVANALFHMHHGCSIPIVHRDISSKNVLLSSDYEEARIIDFGTAKFLNPNSKNMTTFAGTFGYAAPELAFIMEANEKCDVYSFGVLTLEIIMGTHPAELISYLAEKPTNNGLLFKNLVDPRLSPLRFRKSIQDEVILIAKIAFSCLIENPRSRPTMEQVSIELVRRPISHLQDQFHSITIAQLMRD 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00117 1016 ProSiteProfiles Protein kinase domain profile. 723 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4119g00117 1016 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 335 650 - -
Pral4119g00117 1016 Pfam Protein kinase domain 727 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4119g00117 1016 PRINTS Leucine-rich repeat signature 576 589 - -
Pral4119g00117 1016 PRINTS Leucine-rich repeat signature 555 568 - -
Pral4119g00117 1016 Pfam Leucine rich repeat 530 589 IPR001611 GO:0005515
Pral4119g00117 1016 FunFam Nuclear pore complex protein NUP107 25 178 - -
Pral4119g00117 1016 ProSitePatterns Tyrosine protein kinases specific active-site signature. 847 859 IPR008266 GO:0004672|GO:0006468
Pral4119g00117 1016 Gene3D Ribonuclease Inhibitor 313 648 IPR032675 -
Pral4119g00117 1016 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Pral4119g00117 1016 SMART LRR_typ_2 118 142 IPR003591 -
Pral4119g00117 1016 SMART LRR_typ_2 263 287 IPR003591 -
Pral4119g00117 1016 SMART LRR_typ_2 479 503 IPR003591 -
Pral4119g00117 1016 SMART LRR_typ_2 191 215 IPR003591 -
Pral4119g00117 1016 SMART LRR_typ_2 576 599 IPR003591 -
Pral4119g00117 1016 SMART LRR_typ_2 528 551 IPR003591 -
Pral4119g00117 1016 SMART LRR_typ_2 504 527 IPR003591 -
Pral4119g00117 1016 SMART LRR_typ_2 552 575 IPR003591 -
Pral4119g00117 1016 SMART LRR_typ_2 335 359 IPR003591 -
Pral4119g00117 1016 FunFam Leucine-rich receptor-like protein kinase family protein 232 330 - -
Pral4119g00117 1016 FunFam Leucine-rich repeat receptor protein kinase MSP1 686 801 - -
Pral4119g00117 1016 SUPERFAMILY Protein kinase-like (PK-like) 702 991 IPR011009 -
Pral4119g00117 1016 SUPERFAMILY RNI-like 74 357 - -
Pral4119g00117 1016 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
Pral4119g00117 1016 Gene3D Transferase(Phosphotransferase) domain 1 802 1007 - -
Pral4119g00117 1016 Gene3D Phosphorylase Kinase; domain 1 683 801 - -
Pral4119g00117 1016 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 317 994 - -
Pral4119g00117 1016 SUPERFAMILY RNI-like 295 616 - -
Pral4119g00117 1016 Gene3D Ribonuclease Inhibitor 241 312 IPR032675 -
Pral4119g00117 1016 Gene3D Ribonuclease Inhibitor 179 240 IPR032675 -
Pral4119g00117 1016 FunFam MDIS1-interacting receptor like kinase 2 802 998 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00117 Pral-Chr4119 1551167 1554318 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4119g00117 4 900 Receptor kinase-like Gene Family AT4G08850 41.283 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4119g00117 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00117 - - pcin:129295243 1130.55