Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00112 ATGTCTGAAAGAGATTCCACCAAGCTGCTAGCATTGTTCTTCTTTGTTGCTTTCTTTGCGCCTGTTGTTGCTGGAGATAGCGAAGCAAAAGCTCTGTTGAAGTGGAAGGATAGCTTTAACAACCAAAGCAAAGCTCCCTTGTCCTCTTGGAATAAAGACACTAATCCTTGTAGACAATTCTGGAGGGGAATCTCTTGTGATGAATCCATGTCTGTGACTAACATAAGTCTCTCAAATCTTGGCCTTCAAGGTACACTTTCCACTCTCAACTTTGTTTCCTTTCCTAATCTCCTGCACTTCAACATAAGTTACAACCATTTTTATGGAGAGATTCCCCATGAGATTGGTAATTTGTCCAGAATTCTGATGTTGAGTTTGTCAGATAATTCAATTATTGGTCCCATTCCTCTTGAAATATGGACTCTAACCACTCTAAAACATCTTGATCTTAGTGCATGTAATCTCACAGGACAAATTCCTAAAGAAATTGGGAATTTGAGGAATTTGAATTACCTAAATCTTGGAGAAAATTCCCAGATTTCTGGTCCCATTCCTGAAGAGATTGGAATGTTGAGCCATCTTGAAGTGCTTCGTTTGCCAAAAAATCATCTATCGGGAAGAATCCCATCATCAATTGGAAATTTGACAAAGTTACAAATACTCTTTCTTTCCATGAACAATCTCGCAGGTCCTATTCCTTCTGGATTGTGGAAACTCTATTCTCTCATTGATATTCAGTTACACCAGAATAGACTTTCTGGGTCAATCTCTCCCTCTATAGGAAACCTAACAAATCTCCAACACTTGGCCTTAGCTGATAACAGGTTTTCTGGTCCGATTCCACAATCCATTGGAAAGTTGATCAATGTGATCGAACTCTATCTATATAATAACAATCTTTCAGGACCTATTCCTTCCACTATAGGAAACATGACAAAGCTTAACAATCTAGTGTTGTTAGTGAACAATCTCAGTGGTCAACTTCCAAGAGAAATCAATAATATAAGTTGGCAAAATTTACAACTGGGGAATAATCATTTTCATGGCCATTTGCCACAACATATTTGTCAAGGTGGGGAGTTAAATAAGTTTGTTGTTCAAGGTAACCAGTTCACTGGTCTGATTCCAAGAAGTTTGAAGAATTGTCCTAGTCTAAAAAGACTCAAGCTTAATGATAACCAATTAGTTGATAATATGACAGATGCTTTTGGCATATATCCTCATTTAGATCACATTGATCTAAGTGAAAATCAATTTTATGGCCAACTTTCATCTAGATGGGGGAAGTGTCAAAATCTCACACAGATGATTATTCACAATAACAGGCTTTCTGGTCACATACCACCAGAACTAGGAGATTCAACTAAGCTTGGTTTACTTAACTTGTCTTCAAATCATTTATCTGGACAAATTCCAAAAGAACTGGGGAAGTTGATAATTTTGCAAGAACTCTCTTTGAGCCACAATAACTTCTCTGGTAATGTCCCCTCAAACATAAGATCGCTTAGTCAACTTGAAATTTTGGAGCTGGCAGTAAATAATTTCAATGGCTCAATCACAAGAGAGCTCGGGGAATTAAAAACCCTAAGGGTCTTGAACTTGAGCAAAAACAAATTTGATGAAAGCATTCCCTCTGAGTTCGGTGAACTCCAGCACCTTGAACAACTTGATCTTAGTGACAATTTGCTAATTGGAAAAATACCATCCAGGCTTGGAATGTTATCCAATTTGCAAGTATTAAACCTCTCACATAATAATATCACTGGCTCCATTCCTTCTGATTTTGGCGGATCAATGTCACCTTTGTCTATAGTTGACATATCATATAATCAATTAGAAGGCCCCATTCCGAACAAACCAGCCTTTCACAACTTTGATGCATTAAGGAACAATAAAGGTTTGTGTGGCAATGTGAATGGTTTAAGTTCATGTCATGATTTACAAACAAATGGACATGGCCATAAGAGCAAAAAAGAAGGTTCACCAGAAGATGTTTATTTTGTATGGAGTCTTGAAAGAGAAATATTGTACGAAGATATCATTGAAGCCACAAAGGAATTTGATAAAAGATATCTCATCGGAAAAGGGGGCCAAGGAAGTGTTTATAGGGCTCAATTGCCAACAGGTGATGTTGTTGCAGTAAAGAAGCTTCATTCAATGCCAAGTGGAGAAATATCCAACCAAAAAGCTTTCACAAGTGAGATTCAAGCTTTGACAGAAATCAAACATCGTAACATTGTGAAGTTGTATGGGTTTTATTCCAATTCACAGTTCTCCATTTTGGTTTATGAGTTCTTGGAAGGTGGGAGTTTGGACATCATACTAAAGAATGAGAAACAAGCTACTGAGTTTGAGTGGAACAAGAGGGTAAATGTTGTCAAAGGTGTGGCTAATGCTTTATTCCATATGCATCATGGTTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAACATTCTTCTAGGTTCTGACTACGAAGAAGCTCGCATCATTGACTTTGGAACAGCAAAGTTTTTGAATCCTAACTCAAACAACATGACCACATTTGCTGGCACATTTGGGTATGCTGCGCCAGCAAACGAGAAATGTGACGTTTATAGCTTTGGAGTGTTGACTCTAGAAATCATTATGGGTGCACATCCAACAGAGCTTATTTCATCCTTGGCGGAGAATTCAACCAATAATGATTTGTTGTTAAGTGATGTGTTGGACCCACGTCTCTCTTCACTTACAAAACCCATCCTAGATGATGTGATCTTAGTTGCAAAAATAGCATTTTCTTGCTTGAATGAGACTCCTCAGTCTCGTCCAACCATGGAACAAGTATCTATAGAGCTTGCAAGGACACCAAAATCTTATTCAGAGGATCAATTTCACGCCATCACAATTGGGCAACTAATGAGGGAATGA 2916 0.3796 MSERDSTKLLALFFFVAFFAPVVAGDSEAKALLKWKDSFNNQSKAPLSSWNKDTNPCRQFWRGISCDESMSVTNISLSNLGLQGTLSTLNFVSFPNLLHFNISYNHFYGEIPHEIGNLSRILMLSLSDNSIIGPIPLEIWTLTTLKHLDLSACNLTGQIPKEIGNLRNLNYLNLGENSQISGPIPEEIGMLSHLEVLRLPKNHLSGRIPSSIGNLTKLQILFLSMNNLAGPIPSGLWKLYSLIDIQLHQNRLSGSISPSIGNLTNLQHLALADNRFSGPIPQSIGKLINVIELYLYNNNLSGPIPSTIGNMTKLNNLVLLVNNLSGQLPREINNISWQNLQLGNNHFHGHLPQHICQGGELNKFVVQGNQFTGLIPRSLKNCPSLKRLKLNDNQLVDNMTDAFGIYPHLDHIDLSENQFYGQLSSRWGKCQNLTQMIIHNNRLSGHIPPELGDSTKLGLLNLSSNHLSGQIPKELGKLIILQELSLSHNNFSGNVPSNIRSLSQLEILELAVNNFNGSITRELGELKTLRVLNLSKNKFDESIPSEFGELQHLEQLDLSDNLLIGKIPSRLGMLSNLQVLNLSHNNITGSIPSDFGGSMSPLSIVDISYNQLEGPIPNKPAFHNFDALRNNKGLCGNVNGLSSCHDLQTNGHGHKSKKEGSPEDVYFVWSLEREILYEDIIEATKEFDKRYLIGKGGQGSVYRAQLPTGDVVAVKKLHSMPSGEISNQKAFTSEIQALTEIKHRNIVKLYGFYSNSQFSILVYEFLEGGSLDIILKNEKQATEFEWNKRVNVVKGVANALFHMHHGCSIPIVHRDISSKNILLGSDYEEARIIDFGTAKFLNPNSNNMTTFAGTFGYAAPANEKCDVYSFGVLTLEIIMGAHPTELISSLAENSTNNDLLLSDVLDPRLSSLTKPILDDVILVAKIAFSCLNETPQSRPTMEQVSIELARTPKSYSEDQFHAITIGQLMRE 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00112 971 ProSiteProfiles Leucine-rich repeat profile. 576 598 IPR001611 GO:0005515
Pral4119g00112 971 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 257 335 - -
Pral4119g00112 971 Gene3D Transferase(Phosphotransferase) domain 1 766 965 - -
Pral4119g00112 971 FunFam Leucine-rich repeat receptor protein kinase MSP1 650 765 - -
Pral4119g00112 971 ProSitePatterns Tyrosine protein kinases specific active-site signature. 811 823 IPR008266 GO:0004672|GO:0006468
Pral4119g00112 971 SUPERFAMILY L domain-like 50 329 - -
Pral4119g00112 971 PANTHER LEUCINE RICH REPEAT KINASE 2 247 951 - -
Pral4119g00112 971 SUPERFAMILY RNI-like 293 617 - -
Pral4119g00112 971 Pfam Leucine Rich Repeat 145 166 IPR001611 GO:0005515
Pral4119g00112 971 Pfam Leucine Rich Repeat 576 596 IPR001611 GO:0005515
Pral4119g00112 971 SUPERFAMILY Protein kinase-like (PK-like) 664 945 IPR011009 -
Pral4119g00112 971 SMART LRR_typ_2 215 239 IPR003591 -
Pral4119g00112 971 SMART LRR_typ_2 574 597 IPR003591 -
Pral4119g00112 971 SMART LRR_typ_2 142 166 IPR003591 -
Pral4119g00112 971 SMART LRR_typ_2 478 502 IPR003591 -
Pral4119g00112 971 SMART LRR_typ_2 526 549 IPR003591 -
Pral4119g00112 971 SMART LRR_typ_2 550 573 IPR003591 -
Pral4119g00112 971 SMART LRR_typ_2 263 287 IPR003591 -
Pral4119g00112 971 FunFam Nuclear pore complex protein NUP107 25 178 - -
Pral4119g00112 971 ProSiteProfiles Protein kinase domain profile. 687 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4119g00112 971 Gene3D Phosphorylase Kinase; domain 1 649 765 - -
Pral4119g00112 971 Pfam Leucine rich repeat 360 419 IPR001611 GO:0005515
Pral4119g00112 971 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
Pral4119g00112 971 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 256 - -
Pral4119g00112 971 Gene3D Ribonuclease Inhibitor 180 240 IPR032675 -
Pral4119g00112 971 Gene3D Ribonuclease Inhibitor 241 310 IPR032675 -
Pral4119g00112 971 Pfam Protein kinase domain 690 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4119g00112 971 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 336 648 - -
Pral4119g00112 971 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
Pral4119g00112 971 Gene3D Ribonuclease Inhibitor 312 647 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00112 Pral-Chr4119 1335115 1338245 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4119g00112 4 861 Receptor kinase-like Gene Family AT4G08850 41.139 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4119g00112 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00112 - - pcin:129295243 1104.74