Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00109 ATGTCTGAAAGAGATTCCACTAAGCTGCTAGCATTATTCTTCTGTGTTGCTTTATTTGCATCCGTTGCTGCTGGGGAAAGCGAAGCAAAAGCTCTGTTGAAGTGGAGAGATAGCTTTAACAACGAAAGCAGAGCTACGTTGTCTTCTTGGAAGAATGATACTAATCCTTGCAGGCAGTTGTGGAAGGGAATTTCTTGTGATGAATCCATGTCTGTGATCAATATAAGTCTCTCAAAACTTGGCCTTCAAGGTACACTTTCCACTCTCAACTTCGCTGCCTTTCCTCATCTCCTCCACTTCGACGTAAGTTTCAACCATTTTTATGGATACATTCCCCACGAAATTGGTAAATTGTCCAGTATTTTGATGTTGAGTTTGTCAGATAATAGAATTAAGGGTCCCATTCCTCCTGAAATCTGGAATCTAACCACTCTGAATCATCTTCATCTTAGTACATGTAATCTGACAGGACAAATTTCCCATGAAATTGGGAATTTGAGGAATTTGAAACTCCTATGGCTTGGAGAAAATTCCCAGATTTTTGGTCCCATTCCTGAAGAGATTGGAATGTTGAGCAATCTTGAAGAGCTAGGACTTCAAAGAAATTCTCTGTTGGGGAGAATCCCGTCATCAATTGGAAACTTGACAAAGTTACAAAGATTTTTTCTTTTCGAGAACAATCTCGCAGGTCCTATTCCTTCTGGATTGTGGAAACTCTATTCTCTCATTGAAATTCAGTTATATGGTAATAGACTTTCTGGGCCTATCTCTCCCTCTATAGGAAACCTAACAAATCTCCAATACTTGGCCTTAGCTAATAATAGGTTTTCTGGTCTAATTCCACTATCCATTGGTAACTTGATCAATGTGCTGGAACTCTATCTACAGGATAACACTCTTTCAGGATCTATTCCTTCCACTATAGGAAACATGACGAAGCTTAACAATCTAGTATTGTTTGGGAACAATCTCAGTGGTCAACTTCCACCAGAAATCAATAACATAAGTTGGTATAACTTACAACTGGGTGATAATCATTTCCATGGCCATTTGCCACAACAAATATGTCAAGGTGGGAGATTATATAGGTTTATTTCTAAAGGCAACCAATTCACTGGTCCTATTCCAACTAGTTTGAGGAATTGTTCTACTTTGGGTAGGCTTATGCTTCAGGATAACCAATTAGTTGATAATATGACAGATGCTTTTGGTGTATATCCTTATTTGGATTACATTGATCTAAGTGGAAATCAATTGTATGGCCAACTTTCAACTAGATGGGGGAAGTGTCGAAATCTCACACAGATGATTATGCACAATAACAAGCTTTCTGGTCACATACCACCAGAACTAGGAGACTCAACTAAGCTTGGTTTACTTAACTTGTCTTCAAATCATTTGTCGGGACAAATTCCAAAAGAACTGGGGAAGTTGATAATTTTGCAAAAACTCTCTTTGAGTCACAATAACTTCTCTGGTAATGTCCCCTCAAATATAAGATCACTTAGTCGGCTTGAAATTTTAGAGCTAGCAGTAAATAATTTCAATGGCCCAATCACAAGAGAGCTTGGGGAATTAAAAACCTTAAGGGTCTTGAACTTGAGCAAAAACAAGTTTGATGAAAGCATTCCCCTTGAGTTTGGTGAACTCCAACACCTTGAACAGCTTGATCTTAGTGACAATTTGCTAAATGGAAAAATACCATCAAGGCTTGGAATGTTATCCAACTTGCAAGTATTGAACCTCTCACATAATAATCTCACTGGCACCATTCCTTCTGATTTTAGTGGATCAATGTCAACTTTGTCTACAGTTGACATATCATACAATCAATTAGAAGGCCCTGTTCCAATCAAACCAGCCTTTCACAACTTTGATGCATTGAGGAATAACAAAGGTTTGTGCGGTAACGTCACTGGTTTACATGCTTGTGGTGATTTTCGAACAAATGGACATGGCCATACAAGCAAAAAGTTCTTGGTAATATTCCTCCCATTGGCCACACTACTATTAGTAATTGTGGGAGCATCTTTCATTGTTGCTCGAATAGCAACAAAAGCAAAAGGCAAAGATGGAGAGGGTTCACTAGAGGATGTTTATTTTGTATGGAGTCTTGAAAGAGAAATATTGTACGAAGATATCATTGAAGCCACAAAGGAATTTGATGAAAGGTACCTCATCGGAAAAGGGGGCCAAGGAAGTGTTTATAGGGCTGAGTTGCCAGCAGGTGATGTTGTTGCTGTAAAGAAGCTTCATTCAATGCCAAGTGGGGAAATCTCCAACCGGAAAGCTTTCACAAGTGAGATTCGAGCTTTGACAGAAATCAAACATCGTAACATTGTGAAGTTGTATGGGTTTTATTCCAATTCACAGTTCTCCATTTTGGTTTATGAGTTCTTGGAAGGTGGGAGTTTGGACATCATACTAAAGAATGAGAAACAAGCCACTGAGTTTGAGTGGAACAAAAGGGTGAACGTTGTCAAAAGTGTGGCTAATGCTTTATTCTATATGCATCATGGTTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAACATTCTTCTAGGTTCTGACTACGAAGAAGCTCGCATCATTGACTTTGGAACGGCAAAATTTTTGAATCCTGACTCAGACAACATGACCACATTTGCTGGCACATTTGGGTATGCTGCACCAGAGATTGCTTTCATTATGCAAGCGAATGAGAAATGTGATGTTTATAGCTTTGGAGTGTTGACTTTAGAAATCATCATGGGTACACATCCAGCAGAGCTTATTTCATCTTTGGCAGAGAATTCAACCAATAATGATTTGTTGTTAAGTGATGTGTTGGACCCACGACTTTGTTCACTCGCTAAACCACTCATAGATGATGTGATCTTAGTTGCAAAAATAGCATTTTCTTGCTTGAATGAAACTCCTCAGTCTCGTCCAACCATGGAACAAGTATCTACTGAGCTTGCAAGGACACCAAAATCTTACACGGAGGATCAATTTCACACCATCAAAATTGGACAACTAATGAGGGATTGA 3039 0.3886 MSERDSTKLLALFFCVALFASVAAGESEAKALLKWRDSFNNESRATLSSWKNDTNPCRQLWKGISCDESMSVINISLSKLGLQGTLSTLNFAAFPHLLHFDVSFNHFYGYIPHEIGKLSSILMLSLSDNRIKGPIPPEIWNLTTLNHLHLSTCNLTGQISHEIGNLRNLKLLWLGENSQIFGPIPEEIGMLSNLEELGLQRNSLLGRIPSSIGNLTKLQRFFLFENNLAGPIPSGLWKLYSLIEIQLYGNRLSGPISPSIGNLTNLQYLALANNRFSGLIPLSIGNLINVLELYLQDNTLSGSIPSTIGNMTKLNNLVLFGNNLSGQLPPEINNISWYNLQLGDNHFHGHLPQQICQGGRLYRFISKGNQFTGPIPTSLRNCSTLGRLMLQDNQLVDNMTDAFGVYPYLDYIDLSGNQLYGQLSTRWGKCRNLTQMIMHNNKLSGHIPPELGDSTKLGLLNLSSNHLSGQIPKELGKLIILQKLSLSHNNFSGNVPSNIRSLSRLEILELAVNNFNGPITRELGELKTLRVLNLSKNKFDESIPLEFGELQHLEQLDLSDNLLNGKIPSRLGMLSNLQVLNLSHNNLTGTIPSDFSGSMSTLSTVDISYNQLEGPVPIKPAFHNFDALRNNKGLCGNVTGLHACGDFRTNGHGHTSKKFLVIFLPLATLLLVIVGASFIVARIATKAKGKDGEGSLEDVYFVWSLEREILYEDIIEATKEFDERYLIGKGGQGSVYRAELPAGDVVAVKKLHSMPSGEISNRKAFTSEIRALTEIKHRNIVKLYGFYSNSQFSILVYEFLEGGSLDIILKNEKQATEFEWNKRVNVVKSVANALFYMHHGCSIPIVHRDISSKNILLGSDYEEARIIDFGTAKFLNPDSDNMTTFAGTFGYAAPEIAFIMQANEKCDVYSFGVLTLEIIMGTHPAELISSLAENSTNNDLLLSDVLDPRLCSLAKPLIDDVILVAKIAFSCLNETPQSRPTMEQVSTELARTPKSYTEDQFHTIKIGQLMRD 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00109 1012 FunFam Leucine-rich repeat receptor protein kinase MSP1 684 799 - -
Pral4119g00109 1012 Gene3D Ribonuclease Inhibitor 310 645 IPR032675 -
Pral4119g00109 1012 PRINTS Leucine-rich repeat signature 574 587 - -
Pral4119g00109 1012 PRINTS Leucine-rich repeat signature 553 566 - -
Pral4119g00109 1012 SUPERFAMILY L domain-like 68 352 - -
Pral4119g00109 1012 Gene3D Ribonuclease Inhibitor 241 309 IPR032675 -
Pral4119g00109 1012 Gene3D Ribonuclease Inhibitor 179 240 IPR032675 -
Pral4119g00109 1012 SMART LRR_typ_2 287 311 IPR003591 -
Pral4119g00109 1012 SMART LRR_typ_2 118 142 IPR003591 -
Pral4119g00109 1012 SMART LRR_typ_2 550 573 IPR003591 -
Pral4119g00109 1012 SMART LRR_typ_2 263 286 IPR003591 -
Pral4119g00109 1012 SMART LRR_typ_2 526 549 IPR003591 -
Pral4119g00109 1012 SMART LRR_typ_2 574 597 IPR003591 -
Pral4119g00109 1012 SMART LRR_typ_2 478 502 IPR003591 -
Pral4119g00109 1012 SMART LRR_typ_2 191 215 IPR003591 -
Pral4119g00109 1012 Pfam Leucine rich repeat 528 587 IPR001611 GO:0005515
Pral4119g00109 1012 FunFam MDIS1-interacting receptor like kinase 2 800 995 - -
Pral4119g00109 1012 PANTHER LEUCINE RICH REPEAT KINASE 2 284 992 - -
Pral4119g00109 1012 SUPERFAMILY RNI-like 293 615 - -
Pral4119g00109 1012 Pfam Protein kinase domain 725 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4119g00109 1012 ProSiteProfiles Protein kinase domain profile. 721 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4119g00109 1012 FunFam Leucine-rich repeat receptor protein kinase EMS1 184 283 - -
Pral4119g00109 1012 ProSiteProfiles Leucine-rich repeat profile. 576 597 IPR001611 GO:0005515
Pral4119g00109 1012 FunFam Nuclear pore complex protein NUP107 25 180 - -
Pral4119g00109 1012 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Pral4119g00109 1012 Gene3D Ribonuclease Inhibitor 25 178 IPR032675 -
Pral4119g00109 1012 Gene3D Phosphorylase Kinase; domain 1 683 799 - -
Pral4119g00109 1012 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 334 648 - -
Pral4119g00109 1012 Gene3D Transferase(Phosphotransferase) domain 1 800 1007 - -
Pral4119g00109 1012 SUPERFAMILY Protein kinase-like (PK-like) 700 987 IPR011009 -
Pral4119g00109 1012 ProSitePatterns Tyrosine protein kinases specific active-site signature. 845 857 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00109 Pral-Chr4119 1236677 1240081 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4119g00109 4 898 Receptor kinase-like Gene Family AT4G08850 42.032 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4119g00109 Pkinase 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00109 - - pcin:129295243 1184.86