Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4119g00103 ATGGGAATTTCTTGTGATAAATCCCTGTCGGTGATCAACATAAGTCTCCCAAATCTTAGGCTTAATGGTACACTTTCCAGTCTCAACTTCGCTTCCTTTCCTAATCTCCTCTACTTTAACATACAGAACAACCAATTTCATGGAAATATTCCCCACGAAATTGGTCATTTGTCCAGTATTTTGTGGTTGCGTTTGTCAGGTAATCCATTAATTAGGGGTTCCATTCCTCCTGAAATTTGGAATCTAACCACTCTAACTTGTCTTGATCTTACGACATGTAAACTCACTGGACAAATTCCCCAAGAAATTGGGAATTTGAGGAATTTGAGTTGCCTATGGCTTGCAAACAATTCCTTTTTTGGTCCCATTCCTGAAGAGATTGGAATGTTAAGCAATCTTGTATATATTGATTTGGCGGAGAACTCTCTATCAGGGAGAATCCCATCATCAATTGGAAACTTGACCATGTTACAAATACTGTTTCTTGACAAGAACAATCTCGCGGGTCCTATTCCTACTGAATTCTGGAAACTCTATTCTCTCAATAACATTCAGTTATATGAAAATAGTCTTTCAGGGCCAATCTCTCCCTATGTAGGAAACCTAACCAATCTCAAAAAATTTTCCTTTTCTGATAACAGATTCTTTGGTCCAATTCCTCCATCCATAGGCAACTTGATCAATGTAGAGGAGTTTTACCTTTCAAACAACAAGCTTTTAGGATTTATTCCTCCCACTATAGGAAATATGACAAAGCTCACCGCTGTGTTCTTGGACAACAACAGCTTTAGTGGTCAACTTCCACGAGAAATGAATAACTTGACTAGTTGGTATAACATACAACTGAGTTATAATCATCTCAGTGGTCCTTTGCCACAAAGTATTTGCCAAAGTGGGCAGTTGTTTAGGCTTGCTGCTAATGATAACCATTTTACTGGTCCTATTCCAACTAGTTTGAAGAATTGTTCTAGTCTACAAAGACTCAAGCTTGATAATAACCAAATAGATGAAAATATAACAGATGCTTTTGGAGTGTATCCTCATTTATACCACATCAATCTAAGTGGAAATCAATTGTATGGCCACCTTTCATCAAGGTGGGGTAAGTGTCAAAATCTTACACAATTGATTATTCACAATAATAGGCTGTCTGGTGGTATACCACCAGAACTAGGAGATGCAGCTAAGCTTGGTTTACTTAACTTGTCCTCAAATCATTTGTCTGGACCAATTCCCAAAACACTAGGGAAGTTGGTCAAGCTAGCAGAACTCTCTTTGAGTCACAATAACTTCTCTGGTAATGTCCTCTCAAGTATAAGATCACTTAGTCAACTTCAAACTTTGGAGTTGGCAGCAAATAAATTTAATGGCTCAATCACAAGAGAGCTTGGGGAATTAACCAGATTGAAGTTCTTGAACTTGAGCAAAAACAAATTTGCTGGAAGCATTCCCCCTGAGTTTGGTGAACTCCAAGACCTTGAACATCTTGATCTTAGTGACAATTTGCTAGTTGGAACTATACCATCTGGGCTTGGAATGTTATCCAACTTGCAAGTATTGAACCTCTCACATAATAATCTCACCGGCACCATTCCTTCAAGTTTAAATAGACCAATGTCAGCTTTGTCTACAGTTGACATATCATATAATCAATTAATAGGCCCCGTTCCAAACAAACAAGCCTTTCACAACTTTGATGCTTTAAGGAACAATAAAGGTTTGTGCGGTAACATCAATGGTTTAAGTCCCTGTGGTGATCGTCAAACAAATGGACACGGGCATAAGAGCAAAAAGTTCCTGACAATATTCCTCCCATTGGCCATACTGCTATTAGTATTTGTTGGAGCATCTTTCATTTTTTCTCGAATAGCAGCAAAAGCAAAAGCAAAAGGCAAAGAGGGAGAAAATCCAACTGAAGATGTTTATTTTGTATGGAGTCTCGAAAGAGAAATACTGTATGAAGATATCATTGAAGCCACAAAAGAATTTGATGAAAGATATCTGGTCGGGAAAGGAGGCCAAGGAAGTGTTTATAGGGCTGAGTTGCCTACAGGTGATGTTGTCGCTGTAAAGAAGCTTCATTCAATGCCAAGTGGAGATATTTCCAACCAAAAAGCCTTTACAAGTGAGATTCAAGCCTTGACAGAAATCAAACATCACAACATTGTGAAATTGTATGGGTTTTATTCCAATTCACAATTCTCCTTTTTGGTTTATGAGTTCTTGGATGGTGGCAGCTTGGATGACATATTAAAGAATCAAAATCAAGCCACTGAATTTGAATGGAATAAGAGGGTAAATGTTGTTAAAGGTGTGGCTAATGCTTTATTCCATATGCATCATGGTTGTTCAATCCCTATTGTGCATCGTGACATATCAAGCAAGAACATTCTTCTAACTTCTGATTTTGAGGAAGCTCGCATCATTGACTTTGGAACAGCGAAGTTTTTGAATCCTAACTCAAACAATATAACCACATTTGCTGGCACATTTGGGTATGCTGCTCCAGAGATTGCTTTTATTATGAAAGCAAATGAAAAATGTGATGTTTATAGCTTTGGCGTGTTAACTCTAGAAATCATTATGGGGGAACATCCAGCTAAGCTTATTTCATCTTTGGCGGAGAATTCAACCAATAATGACATGTTGTTAAAGGATGTGTTGGACCCACGACTATCTCCACTGACAAAACCAATCCTAGATGATGTGATTTTAGTTGCAAAAATAGCTTTTTGTTGCTTGAATGAGACTCCTCAATCTCGTCCAACCATGGAACAAGTATCTGTGGAACTAGCAAGGACACCAAAATCTTATATAGAGGATCAATTTCACACCATCACAATCGGGGAACTAATGACGGATTGA 2865 0.3808 MGISCDKSLSVINISLPNLRLNGTLSSLNFASFPNLLYFNIQNNQFHGNIPHEIGHLSSILWLRLSGNPLIRGSIPPEIWNLTTLTCLDLTTCKLTGQIPQEIGNLRNLSCLWLANNSFFGPIPEEIGMLSNLVYIDLAENSLSGRIPSSIGNLTMLQILFLDKNNLAGPIPTEFWKLYSLNNIQLYENSLSGPISPYVGNLTNLKKFSFSDNRFFGPIPPSIGNLINVEEFYLSNNKLLGFIPPTIGNMTKLTAVFLDNNSFSGQLPREMNNLTSWYNIQLSYNHLSGPLPQSICQSGQLFRLAANDNHFTGPIPTSLKNCSSLQRLKLDNNQIDENITDAFGVYPHLYHINLSGNQLYGHLSSRWGKCQNLTQLIIHNNRLSGGIPPELGDAAKLGLLNLSSNHLSGPIPKTLGKLVKLAELSLSHNNFSGNVLSSIRSLSQLQTLELAANKFNGSITRELGELTRLKFLNLSKNKFAGSIPPEFGELQDLEHLDLSDNLLVGTIPSGLGMLSNLQVLNLSHNNLTGTIPSSLNRPMSALSTVDISYNQLIGPVPNKQAFHNFDALRNNKGLCGNINGLSPCGDRQTNGHGHKSKKFLTIFLPLAILLLVFVGASFIFSRIAAKAKAKGKEGENPTEDVYFVWSLEREILYEDIIEATKEFDERYLVGKGGQGSVYRAELPTGDVVAVKKLHSMPSGDISNQKAFTSEIQALTEIKHHNIVKLYGFYSNSQFSFLVYEFLDGGSLDDILKNQNQATEFEWNKRVNVVKGVANALFHMHHGCSIPIVHRDISSKNILLTSDFEEARIIDFGTAKFLNPNSNNITTFAGTFGYAAPEIAFIMKANEKCDVYSFGVLTLEIIMGEHPAKLISSLAENSTNNDMLLKDVLDPRLSPLTKPILDDVILVAKIAFCCLNETPQSRPTMEQVSVELARTPKSYIEDQFHTITIGELMTD 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4119g00103 954 FunFam Leucine-rich repeat receptor-like protein kinase TDR 291 586 - -
Pral4119g00103 954 Pfam Protein kinase domain 667 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4119g00103 954 SUPERFAMILY L domain-like 29 293 - -
Pral4119g00103 954 SUPERFAMILY Protein kinase-like (PK-like) 641 928 IPR011009 -
Pral4119g00103 954 SUPERFAMILY RNI-like 234 579 - -
Pral4119g00103 954 Gene3D Phosphorylase Kinase; domain 1 623 741 - -
Pral4119g00103 954 Gene3D Ribonuclease Inhibitor 296 592 IPR032675 -
Pral4119g00103 954 FunFam MDIS1-interacting receptor like kinase 2 742 937 - -
Pral4119g00103 954 SMART LRR_typ_2 226 250 IPR003591 -
Pral4119g00103 954 SMART LRR_typ_2 57 82 IPR003591 -
Pral4119g00103 954 SMART LRR_typ_2 490 513 IPR003591 -
Pral4119g00103 954 SMART LRR_typ_2 130 154 IPR003591 -
Pral4119g00103 954 SMART LRR_typ_2 466 489 IPR003591 -
Pral4119g00103 954 SMART LRR_typ_2 514 538 IPR003591 -
Pral4119g00103 954 PRINTS Leucine-rich repeat signature 514 527 - -
Pral4119g00103 954 PRINTS Leucine-rich repeat signature 493 506 - -
Pral4119g00103 954 Gene3D Ribonuclease Inhibitor 124 180 IPR032675 -
Pral4119g00103 954 Gene3D Ribonuclease Inhibitor 1 123 IPR032675 -
Pral4119g00103 954 Gene3D Ribonuclease Inhibitor 181 295 IPR032675 -
Pral4119g00103 954 FunFam Leucine-rich repeat receptor protein kinase MSP1 626 741 - -
Pral4119g00103 954 PANTHER LEUCINE RICH REPEAT KINASE 2 185 933 - -
Pral4119g00103 954 ProSiteProfiles Leucine-rich repeat profile. 516 538 IPR001611 GO:0005515
Pral4119g00103 954 ProSiteProfiles Protein kinase domain profile. 663 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4119g00103 954 Pfam Leucine Rich Repeat 516 535 IPR001611 GO:0005515
Pral4119g00103 954 ProSitePatterns Tyrosine protein kinases specific active-site signature. 787 799 IPR008266 GO:0004672|GO:0006468
Pral4119g00103 954 FunFam Leucine-rich repeat receptor-like protein kinase TDR 5 290 - -
Pral4119g00103 954 Gene3D Transferase(Phosphotransferase) domain 1 742 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4119g00103 Pral-Chr4119 957630 960819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4119g00103 2 840 Receptor kinase-like Gene Family AT4G08850 41.991 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4119g00103 Pkinase 4.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4119g00103 - - pcin:129295243 1120.92